Flammeovirga pectinis: EI427_13065
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Entry
EI427_13065 CDS
T05771
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
fll
Flammeovirga pectinis
Brite
KEGG Orthology (KO) [BR:
fll00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EI427_13065 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fll03019
]
EI427_13065 (rnc)
03009 Ribosome biogenesis [BR:
fll03009
]
EI427_13065 (rnc)
03036 Chromosome and associated proteins [BR:
fll03036
]
EI427_13065 (rnc)
Enzymes [BR:
fll01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
EI427_13065 (rnc)
Messenger RNA biogenesis [BR:
fll03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EI427_13065 (rnc)
Ribosome biogenesis [BR:
fll03009
]
Eukaryotic type
90S particles
RNase
EI427_13065 (rnc)
Prokaryotic type
rRNA processing factors
EI427_13065 (rnc)
Chromosome and associated proteins [BR:
fll03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
EI427_13065 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AZQ63135
UniProt:
A0A3S9P4J4
LinkDB
All DBs
Position
1:3257283..3258026
Genome browser
AA seq
247 aa
AA seq
DB search
MNLGKLLKRWVTPYNEQETKLAEVIKRVIGRKPYNIKLYHLAMQHTSVAFESDAVKGFKE
SNERLEYLGDAVLGSVVAEYLFKRYPYKDEGFLTEIRSRIVNRESLNRLAVKIGLSQMVA
FEGRKNSALSHKSIYGDAMEAFIGAVYLDLGFHFTRRFIIHSLLMQHYDIEEIIETTTNF
KSLIIEWAQKNSKVVEFTISKQGGKDGKQFKVNLLIDDELQALGSGYSKKKAEQDAARKT
CEALSLI
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaggaaaactcttaaagagatgggtcacaccttataatgagcaggagacaaaa
ttagccgaagtaattaaacgtgttatcggtagaaagccatacaatatcaaattgtatcat
cttgcaatgcaacatacttctgttgcttttgaaagtgatgctgtaaaaggctttaaggaa
tctaatgaaaggttagaatatttaggtgatgcagtgttaggatctgtagtagccgaatat
cttttcaaaagatatccctacaaagatgaaggttttcttacagaaatacgttctcgtatt
gtaaatagagaatcgttaaataggctagcagttaaaattggtctaagccaaatggttgct
tttgaaggtcgtaaaaattcagcattaagtcataagtcaatctatggcgatgcaatggag
gcttttattggtgcagtttatttagatttagggtttcatttcacacgtcgtttcatcatt
catagtttattgatgcaacattatgacattgaagaaataattgaaaccactaccaatttt
aaaagtctcattattgagtgggctcaaaaaaatagtaaagtcgttgaatttactatttca
aagcaaggaggaaaagacggtaagcagtttaaagttaatttattaattgacgatgaattg
caagcgttaggttctggttacagtaagaaaaaagctgaacaagatgccgctcgaaaaact
tgcgaagcactttcacttatttag
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