Flammeovirga sp. MY04: MY04_0215
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Entry
MY04_0215 CDS
T04442
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
flm
Flammeovirga sp. MY04
Pathway
flm02024
Quorum sensing
flm03060
Protein export
flm03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
MY04_0215
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
MY04_0215
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MY04_0215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
flm02044
]
MY04_0215
Secretion system [BR:
flm02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
MY04_0215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
DUF7588
Motif
Other DBs
NCBI-ProteinID:
ANQ47597
LinkDB
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Position
1:complement(282128..285103)
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AA seq
991 aa
AA seq
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MNNRGFILFIAVLVTVFSLFDLSFSWVSRNIQSQADEYAMDSEGHVDYFKKQAYIDSLWK
TPVYDLGFRSYTYEEVKNKELALGLDLQGGMSVTLEVSPVEVVKAMAGANVDDNFLAALA
EAETLTRENRETFTNNFFTSLKEKNENVPFATYFASSANKNRISFNSPDKAVQDLVESEV
DGAVERAFEIIRTRIDKFGVTQPNIQRLQGTNRIAIELPGVDNPQRVRNLLQGVAKLEFL
EVWTLQEAQPYIFQLNQEWVKQEKARKALAGDVAATETTTDAAKSSSENSLFEGDSTDVA
ANDSTATPEDELYSPIMKGFSPYGLVFADTDTASVNKMLRDKEVMSIAPSNMKFLWGHKP
FQTNDQGVEFYNLYVIKKEREAKLTGEVITDAIQSYDQKNQPAVSMVMNVEGAKKWKKMT
GQNLGRQIAIALDNEVYTAPNVQSEIDGGRSEITGNFDVAEAKDLANILKAGKLPAPTKI
IEEVVVGPSLGKVAQSEGINSVLLGLGLVILFMVIYYSKGGLIANAALGLNIFFIFGILA
ELGAALTLPGIAGIVLTIGMSIDANVLIFERIREEQRNGKSLLTSISNGYDRAFWTIFDA
NLTTLVTGGFLYYFGLGPIKGFAVTLMIGIVCSFFSAVFISRLIVSQIVKSKGENAKLNF
ETGLSKKLAGKMNVDFMGKRKVAYIFSAAIIAIGLGSLATTGLNLGVDFTGGRTYIVSFD
QAVVPSKLQGALVKNVEGKPVEVKTYGNDNTLKITTAYLIDNESSETDAKVQSAIVTGIE
SFTGLKYADKQNPSATTFVIPSTSKVGASIANDITDGAEEAVLFSLLGIFLYIWVRFRQW
NFGAGAIMALLHDTLVVFGAFGIANLLGAGFELDQVFIAAVLTVIGYSINDTVVVFDRVR
EEQENATVGTKMMDVMNKAINGTMNRTIITSFTTLLVILVLLIFGGEALRGFSFSLFIGI
MIGTYSSIFIAAPLVYDTSKKRIEKEEKANA
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgaataacagaggttttatactgttcattgctgttctagtaacagtattcagtcttttc
gacctttctttctcatgggtttcaagaaacatccaatctcaagcggatgagtatgccatg
gattctgaaggtcatgtagactactttaaaaagcaagcatacattgattctctatggaaa
actccagtgtatgacttaggtttcagatcttacacttacgaagaagtaaagaacaaagaa
ttggctttgggtcttgaccttcaaggtggtatgtcagtaacattagaagtttctcctgta
gaagtagtaaaagctatggcaggtgctaacgttgacgacaacttcttagctgctttagct
gaagctgaaacattaacaagagaaaacagagaaacatttactaataacttcttcacttca
ttaaaagagaagaacgaaaatgttcctttcgctacttactttgcttcatcagcaaacaaa
aacagaatttcattcaactcgccagacaaagccgttcaagacttagtagaaagcgaagtg
gatggtgctgtagaaagagcattcgaaattatccgtactcgtattgacaagtttggtgta
actcaaccaaacatccaacgtcttcaaggtactaaccgtatcgcaatcgaattgccaggt
gtagataaccctcaacgtgtgcgtaacctattacaaggtgttgcaaagttagaattctta
gaagtatggacacttcaagaagctcaaccttacatcttccaattgaaccaagagtgggtg
aagcaagagaaagcacgtaaagctttagctggcgatgttgctgcaacagaaacaacaact
gatgctgctaaatcttcttctgaaaactcacttttcgaaggtgattctacagatgtagct
gcaaatgattctactgcaactcctgaggatgagttatactctcctatcatgaaaggtttc
tctccttacggtttagtattcgctgatactgatactgcttcagtaaacaaaatgcttcgt
gataaagaagtgatgtcaatcgctccttctaacatgaaattcttatggggtcacaagcct
ttccaaacaaacgatcaaggtgtagaattctataacctttacgtaatcaagaaagagcgt
gaggcaaaattaactggtgaggtgatcactgacgcgatccagtcgtatgaccaaaagaac
caacctgcagtttctatggtaatgaacgtagaaggtgctaagaaatggaaaaaaatgact
ggccaaaacttaggtcgtcaaatcgctatcgctctagataacgaagtatatactgctcca
aacgtacaatcagaaatcgacggtggtcgttctgaaatcactggtaacttcgacgttgct
gaggcgaaagacttagcaaacatcttgaaagctggtaaacttcctgctcctacaaaaatt
attgaagaagtagtagttggtccatcattaggtaaagttgctcaatcagaaggtatcaac
tctgtattattaggtcttggtctagtaatcttgttcatggtaatttactactctaaaggt
ggtttaattgcaaacgctgcattaggtttgaacatcttcttcatcttcggtattcttgct
gagcttggagctgcattgacactacctggtattgctggtatcgtacttacaattggtatg
tcgattgacgccaacgtactaatcttcgaacgtattcgtgaagagcaaagaaatggcaag
tcgttattgacttcaatttctaacggttatgacagagcattctggactatctttgatgcc
aacttaactacattagtaactggtggtttcctttactacttcggtttaggtccaatcaaa
ggtttcgcagtaacattaatgatcggtatcgtttgttcattcttctcagctgtatttatt
tctcgtttgatcgtttcacaaatcgtgaagagcaaaggtgaaaacgctaagttgaacttc
gaaactggtttatctaagaaattagctggtaaaatgaatgttgactttatgggtaaacgt
aaagttgcttacatcttctctgcagctattatcgctattggtcttggttcattagcaact
acaggtcttaacttaggtgttgacttcactggtgggcgtacgtatattgtaagcttcgat
caagcagtagttccatctaaattacaaggtgctttagtgaaaaatgtagaaggtaagccg
gttgaagtgaaaacttacggtaacgacaatacattaaaaatcactactgcatacttaatc
gataacgaatcatcagaaactgatgctaaagtacagagtgcaattgttacaggtatcgaa
agcttcacaggcttgaaatatgctgacaagcaaaacccttctgctactacattcgttatt
ccatcaacttcaaaagtaggtgcttcgattgcaaatgatattacagatggtgctgaagag
gcagtattgttctctttattaggtatcttcttgtacatctgggtacgtttccgtcagtgg
aacttcggtgctggtgcaatcatggccttattacacgatacattggtagtatttggtgcg
ttcggtattgctaaccttttaggtgcaggtttcgaattagaccaagtattcatcgccgcg
gtacttactgtaattggttattcaattaacgatacagtggtagtatttgaccgtgttcgt
gaagagcaagaaaatgctactgtaggtactaaaatgatggacgtaatgaacaaagcgatc
aacggtactatgaaccgtacgatcattacttcattcactacattgttagtaatcttagta
ttgttaattttcggtggtgaggcattgagaggattctcattctcattattcatcggtatt
atgatcggtacttactcatcgatctttatcgctgctccacttgtatacgatacatctaag
aaaagaatcgaaaaagaagaaaaagctaatgcttaa
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