Flammeovirga sp. MY04: MY04_0337
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Entry
MY04_0337 CDS
T04442
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
flm
Flammeovirga sp. MY04
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flm03400
]
MY04_0337 (sbcD)
DNA repair and recombination proteins [BR:
flm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MY04_0337 (sbcD)
Archaeal homologous recombinant proteins
MY04_0337 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ANQ47719
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Position
1:424849..426096
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AA seq
415 aa
AA seq
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MKILHTADWHIGKRLLNYSLEEDFERFKDWLIQFINKNNIDLLIVAGDIFDSAYPSLGSQ
KQFLDLLSRLQNECHQIQVIITDGNHDSVSSMGITIEIAKHVNTQIISGVTHQLADEIIE
VKDKNGALQLVVAAVPFLRDRDLKKMVEGSTFDDRIQAIKEGVKSHYQEIGAIIKDRNYS
VPALAMGHLYAHGALSDTSSEREIQMGHQAGVEGDIFPEIFEYVALGHIHSSQQVKGQVP
IFYSGSPYPLSFSERNYQHGVRIIEVNDKEVTSEKVVIPPQRKLVKVSGTFEECKSKLFK
LENDATQLDQLIELEVIEAKYNPTLFIDIETLIKEFSESYEQHRGIIIKHRHTFKSESKS
AADLFENHIDLDDLTPLDIFKQRLEKEDKIEIDEELKDQLIQAFIEIEQNEETTN
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacttcacacagcagactggcatattggtaaacgcttacttaattattcttta
gaagaagattttgaacgattcaaagattggttaattcaattcataaataaaaataatatt
gatttactgatagtagcaggtgatatttttgattcagcttatccctctttaggtagtcaa
aaacaatttttagatctcttaagtagattacaaaacgaatgtcatcagatccaagtaatt
atcacggatggtaaccatgatagtgtttcatctatgggaatcactatagaaattgccaag
catgtgaacactcaaattataagtggtgtgactcatcagttagctgatgaaataattgaa
gtaaaagacaaaaatggtgcacttcaattggtggtagctgccgtcccttttttaagggat
agagacctcaagaaaatggttgaaggaagtacttttgatgatagaattcaagccataaaa
gaaggggtgaaatctcattatcaagaaatcggggcgataattaaagatagaaattattct
gttccagctttagctatggggcatttatatgcgcatggagcattatcagatactagtagt
gaaagggaaatacagatggggcatcaagcgggggtagaaggtgatattttcccagaaatc
tttgaatatgttgccttaggacacattcactcttctcaacaagtaaaaggacaagtgccc
attttttattcaggttcaccatatcctttaagtttctcagaacgtaattaccaacacgga
gttagaataattgaggtgaatgacaaggaagtgacttctgaaaaagtggtaattccacct
caaagaaaattggttaaagtaagtggaacttttgaggagtgtaaaagcaaacttttcaaa
ttagaaaatgatgctactcagctggatcaactgatcgaattggaagtgattgaagcaaaa
tataatcccactttatttattgatattgaaacgcttatcaaggagtttagtgaaagctat
gaacaacatagagggataatcatcaaacatcgacatacttttaaatctgagtctaaatct
gctgctgatttgttcgaaaatcatattgacttagacgatctgactccattggatattttt
aaacaacgattagaaaaagaagataaaattgagattgatgaggaattgaaagatcagttg
atacaggcttttattgaaatagaacaaaacgaagaaacgactaactaa
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