Flammeovirga sp. MY04: MY04_0338
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Entry
MY04_0338 CDS
T04442
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
flm
Flammeovirga sp. MY04
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flm03400
]
MY04_0338
DNA repair and recombination proteins [BR:
flm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MY04_0338
Archaeal homologous recombinant proteins
MY04_0338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
ABC_ATPase
AAA_22
AAA_21
MMR_HSR1
eIF-5_eIF-2B
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ANQ47720
LinkDB
All DBs
Position
1:426096..429620
Genome browser
AA seq
1174 aa
AA seq
DB search
MRLKRLYIKNINSLKGEHTINFDDTPLKEAGLIAIVGKTGAGKSTILDAITLGLYNRIPR
ASGQFSSNNIQSSGALLTRGETEAVVEVDYEVKNLGKVSSYRSKWTVSTLIKGARKGEIR
DYHMEVGHLETGEIIPIKKGEVPKKNEELIGLSYDQFVKSIMLSQGEFKALLAADEKDRS
ELLEKITKKLDYRQISIAVFERASQLKKQYDILSQVIDAIEIKGEEEIDELQRSYDEHNA
LLIKLDKDKTVGQKSIDVKRTVLDFDLKLEKQNEELDQVIERKEKLKPLRLKVEQYEQVL
PVISLYKECQSLKDRIAKGQVKQEELNNQSKNNKLEIDKNQLKGSEIQSKKEKYLQELSA
SEKLWNEVEGVDKAINDAGIKLKNQESDLEERKENKKKLLADISQKSDSIYKQEQELQLG
KEWLFEHQKLEKIAFDYPLLTNLMKEVEEDQKAFDIKIDQSKEGIKKHLNGKSFPDQLAL
LNQWKLSTENYINEALAKRQLPDLNTEEVNSLMEQLQLMDINSQQSNKVEEQKKDLEQEV
VDLQKEIEGNTKLVEGSKKQLEGIGLFLDELTTKEKRLKWEAAEDIKVLRNQLVENEPCL
VCGSLDHPYTKEVKSEDELQTVQKQLKEVTEKKSQQENELNTFLQNEVKFKTKIEEKKKQ
IVGLKSQLEAINALIGQSQSELELKNISYTSDTFKTFKNEQSLLQDIQNKKEGLNEVLEL
LNKADDVRKSNLQSDGILSKYEGYYQEESLLVDLKRWLDEYQKKQQIVENAPKWLEEYQK
QLTALQSELGKLETLYISKEEETNQTKSFLSKLKDKRFELFKDQMVPEERKLMQEKGKKI
DEQLNEINVILASLKSNEESLTNQLADLKTELAELSDSLLEQEASFDKALEEKGILVGQF
DEVLKEESNHQENKKLLKEVDDLEITLKTSIKTYNEERQQALLKDTIPNETLDEIEEKVK
QQLLKMEELRLTLEEIGGEIKNNEEKKKEVKDKLEQRDKLTPEYNLWRIMEDLIGSAKGD
KFNKFAQSIVLKTLLMKANHHLVKFTDRYLFAEPKTGDNKQLFIIDRYAGDKERVVNSTS
GGESFLLSLSLSLGLADMASKNVKVESLFIDEGFGTLDEQTLDQAISALEHLRDTGGKTI
SLISHLPQIKERIPTKIVLSEGTISGHSVLNIEG
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgagactaaaacgattatacattaagaatataaactcacttaaaggtgagcacaccata
aattttgatgacactcccttaaaagaggcgggcttaatagccattgtagggaaaacaggt
gctggtaaatcgactattttagatgccattactttaggtttgtataacagaattccaagg
gcatctggtcagttttctagtaataatattcagtcttccggagcattattgacacgaggg
gaaactgaagcagttgtggaggtggactatgaggtgaagaacttgggaaaagtatcaagt
tatagaagtaaatggacagtttccactttaataaaaggggcaagaaaaggagaaatccgt
gattatcatatggaagtagggcatcttgaaacaggtgaaatcatccctattaaaaaagga
gaagtcccaaagaaaaacgaggagcttattggtttgagttacgatcaattcgtgaaatct
atcatgttgtcacaaggggagtttaaagcattgttggcggcagacgaaaaagatcgttct
gaattattggagaagattacgaagaagcttgattatagacaaatcagtatagcggttttt
gaaagagcttcacaattaaagaagcagtatgatattctttctcaggtaattgatgcaatt
gaaatcaagggggaggaagagattgatgaacttcaaagatcttatgatgaacacaatgcg
ctattgattaaactcgataaagacaaaacggttggacagaaatcgatagatgttaaacgc
actgttcttgattttgatctcaaattagaaaaacaaaatgaggagttagatcaagtaatc
gagaggaaagaaaagttgaagcctttacgtttaaaggtggaacaatatgaacaggtgctt
cctgtaatttctttatataaagaatgtcagtcactaaaagatcgaatagcaaaaggacaa
gtaaaacaggaggagttaaataatcaatcaaaaaataataagctggagatagataaaaat
cagcttaaaggatctgagatacaaagtaaaaaagagaagtatctccaagaattatcagca
tctgagaaattatggaatgaagtagagggggtggataaagcaattaatgatgctggaata
aaattaaaaaatcaagaatcagatcttgaggaaagaaaggaaaataaaaagaaattacta
gcggatataagtcaaaaatccgattcaatttataaacaagaacaggaactccaattagga
aaagaatggctatttgaacatcaaaaactagaaaagatagcttttgattacccactttta
accaatttgatgaaagaagtggaggaggatcaaaaagcatttgatattaaaattgatcaa
tctaaagaggggatcaaaaagcatttgaatgggaaatcatttcctgatcaattagcacta
ctgaatcaatggaaattatctaccgaaaactatatcaatgaggctttagcaaaacgtcag
cttcctgatttaaatactgaagaggtaaatagcctaatggagcagttgcagttgatggat
attaattctcagcaatcgaataaggtagaagaacaaaagaaggatttggagcaagaagta
gttgatcttcagaaagaaattgaaggaaatactaagctggtagagggtagtaaaaaacag
ttggaaggtattgggttgtttttagatgagctcactacgaaagagaaaaggttgaagtgg
gaagctgctgaggatataaaggtattgaggaatcagttagtggagaatgaaccttgtcta
gtttgcggttctttggatcatccttatacaaaagaagtaaaatcggaagatgagttgcaa
acggtccaaaaacaactcaaggaggtaacggaaaagaaaagtcaacaggagaacgagctc
aatacattccttcaaaatgaagtgaaattcaagactaaaatcgaagaaaagaaaaaacag
attgttggtctgaaatcacaattggaggcaattaatgctttgattggtcaaagtcaaagt
gagttagaacttaagaatatttcttatacatcagatactttcaagacttttaagaacgaa
caatcattacttcaggacattcaaaataaaaaagaaggtttaaatgaggtgcttgagtta
ttgaataaagcagacgatgttcgaaaaagtaatcttcaatcggatggcattttatcgaaa
tatgaggggtattatcaagaagaaagtttgttggtggatctgaaacgttggttggatgaa
tatcagaagaagcaacaaattgtagagaatgcaccgaagtggttggaagaatatcaaaag
caattgactgctcttcagtcagagttgggaaagctggaaactctatatatatctaaagaa
gaggagacgaatcagacaaaatcatttttatcaaaactaaaagataaacgttttgaactc
ttcaaagatcaaatggttcctgaagaaagaaaattgatgcaggaaaaagggaagaaaatt
gatgagcaactaaatgaaatcaatgtaatattagcttctctaaagagtaatgaagaaagt
ctgaccaatcaattagctgatttgaaaactgaattagcggaattatcagatagtttgttg
gaacaagaagcatcttttgataaagcacttgaagaaaagggaattctagtggggcagttt
gatgaagttttaaaagaagaatcaaatcatcaggaaaataaaaagttattgaaggaagta
gatgatttagaaatcactttaaaaacatcgattaagacttataatgaggaaagacagcag
gcgctacttaaagacacaataccaaatgaaacattggatgagatagaggaaaaagtaaag
cagcaacttctgaaaatggaggaattacgactgactttggaagagattggcggggagata
aaaaataatgaagagaagaaaaaagaggtaaaagataaactcgagcaaagagataaacta
acgccggagtataacttatggcgaataatggaagaccttattgggtcagcaaaaggagat
aagttcaataagtttgcacagagtattgtattgaaaactttattgatgaaagccaatcat
catttagtgaagtttactgatcgctacctgtttgcagaacccaaaacgggagacaataaa
cagctattcattattgatcgctatgcgggagacaaagaaagggtggtaaattctactagt
ggaggggagtccttcttgttaagtttatcactttctttgggtttagccgatatggctagt
aagaatgtaaaagtggaaagtttatttattgatgaaggatttggtaccctcgatgaacaa
acgttggatcaagcaatatctgcattggaacatctaagagatactggcggtaagacgatc
tctttgatatcacacttaccacaaattaaagaaaggatacctaccaaaatcgttctttca
gaaggaacgatatctgggcatagtgttttaaatatagaaggataa
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