Flammeovirga sp. MY04: MY04_0514
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Entry
MY04_0514 CDS
T04442
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
flm
Flammeovirga sp. MY04
Pathway
flm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MY04_0514 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
flm03019
]
MY04_0514 (groL)
03110 Chaperones and folding catalysts [BR:
flm03110
]
MY04_0514 (groL)
03029 Mitochondrial biogenesis [BR:
flm03029
]
MY04_0514 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
flm04147
]
MY04_0514 (groL)
Enzymes [BR:
flm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MY04_0514 (groL)
Messenger RNA biogenesis [BR:
flm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MY04_0514 (groL)
Chaperones and folding catalysts [BR:
flm03110
]
Heat shock proteins
HSP60 / Chaperonin
MY04_0514 (groL)
Mitochondrial biogenesis [BR:
flm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MY04_0514 (groL)
Exosome [BR:
flm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MY04_0514 (groL)
Exosomal proteins of other body fluids (saliva and urine)
MY04_0514 (groL)
Exosomal proteins of breast cancer cells
MY04_0514 (groL)
Exosomal proteins of colorectal cancer cells
MY04_0514 (groL)
Exosomal proteins of bladder cancer cells
MY04_0514 (groL)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
ESCRT-II
Motif
Other DBs
NCBI-ProteinID:
ANQ47896
LinkDB
All DBs
Position
1:complement(635350..636987)
Genome browser
AA seq
545 aa
AA seq
DB search
MAKNLHFDTEAIEGLKKGVDALANAVKVTLGPKGRNVILEKSFGSPHVTKDGVSVAKEIE
LAEPIENMGAQLVKEVASKTADEAGDGTTTATVLTQAIFTTGIKNVVAGANPMDLKRGID
KAVKAIVAELKNSSKTVETNKEVEQVATISANNDAEIGKMIAEAMEKVGKDGVITVEEAK
GTETEVKTVEGMQFDRGYLSPYFVTNTEKMEADMESPYILIYDKKVSTMKELLPVLEQVA
QTGKPLVIIAEDVDSEALATLVVNKIRGALKVAAVKAPGFGDRRKAMLQDIAVLTGGTVI
SDETGMKLEDATIDMLGTAEKMIIDKDNTVVVNGAGNADAVAARVAEIRVQIENTTSDYD
KEKLQERLAKLAGGVAIIYIGAATETEMKEKKDRVDDALAATRAAVEEGIVVGGGTALLR
ASSVLDSVDTAHPDEEIGVQIVKTAIQAPLRTILGNAGLEASVIVNKILEGEGNFGFNAR
TEEYQDLVEAGVIDPTKVTRLALEHAASVASLLLTTDCVVSNEKEEAGAAAPAMPPMGGG
MPGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatcttcatttcgatacagaagcaatcgaaggattaaaaaaaggcgttgat
gcattggcaaacgcagttaaagttactttaggaccaaaaggtcgtaacgttattttagaa
aaatcattcggatcaccacacgttactaaagatggtgtatcagtagctaaagaaatcgaa
ttagcagagcctatcgaaaacatgggtgctcagttggtaaaagaagtagcttctaaaact
gctgatgaggcaggtgatggtacaactacagccactgttcttactcaagctatcttcact
acaggtatcaaaaacgtagtggcaggtgctaacccaatggacttgaagcgtggtatcgac
aaagcagtaaaagcgatcgttgctgagttgaaaaactcttcaaagactgttgaaacaaac
aaagaagttgagcaagtagcaacaatttctgcgaacaacgacgctgagatcggtaaaatg
atcgctgaagcaatggaaaaagtaggtaaagatggtgtaatcactgttgaagaagcaaaa
ggtactgaaacagaagtgaaaactgtagaaggtatgcaattcgaccgtggatacctttct
ccatactttgtgacaaacacagagaaaatggaagcagatatggaatctccatacatcttg
atctacgacaagaaagtttctacaatgaaagaattgcttccagtattagagcaagtagct
caaactggcaagcctctagtaatcatcgctgaggatgttgattctgaagcattggctaca
ttagtagtaaacaaaatccgtggtgcattaaaagtagctgctgttaaagctcctggtttt
ggtgaccgtcgtaaagcaatgttacaagacatcgctgtacttacaggtggtactgtaatc
tctgacgaaacaggtatgaagttagaagatgcaactatcgatatgttaggtactgcggag
aaaatgatcatcgacaaagacaacactgttgttgttaacggtgcaggtaatgctgacgct
gttgctgctcgtgttgctgagatccgtgttcaaatcgaaaacacaacttctgattacgat
aaagaaaaattacaagaacgattggctaaattggctggcggtgttgcaattatctatatc
ggtgcagctactgaaacagaaatgaaagaaaagaaagaccgtgtggatgatgctttagca
gcaacaagagcagcggttgaagaaggtatcgtagttggtggaggtactgccctattgaga
gcttcatctgttcttgattctgttgatacagctcacccagacgaagaaattggtgttcaa
atcgttaaaactgctatccaagctccattgagaactatcttgggtaacgctggtttagag
gcatcagttatcgtaaataaaatcttagaaggcgaaggtaacttcggtttcaatgcgcgt
acagaggagtaccaagacttagttgaggctggtgtaatcgacccaactaaagtaactcgt
cttgcacttgagcacgctgcttcagtagcttcattgttgttaactacggactgtgtagtt
tctaacgagaaagaagaagctggtgctgcagctcctgctatgcctccaatgggtggtggt
atgccaggtatgatgtaa
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