Flammeovirga sp. MY04: MY04_0702
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Entry
MY04_0702 CDS
T04442
Name
(GenBank) DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
flm
Flammeovirga sp. MY04
Pathway
flm03030
DNA replication
flm03430
Mismatch repair
flm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MY04_0702
03430 Mismatch repair
MY04_0702
03440 Homologous recombination
MY04_0702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flm03032
]
MY04_0702
03400 DNA repair and recombination proteins [BR:
flm03400
]
MY04_0702
Enzymes [BR:
flm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MY04_0702
DNA replication proteins [BR:
flm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MY04_0702
DNA repair and recombination proteins [BR:
flm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MY04_0702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
DNA_pol_A_exo1
AGA-YXIM_GBD
Motif
Other DBs
NCBI-ProteinID:
ANQ48084
LinkDB
All DBs
Position
1:complement(895238..896158)
Genome browser
AA seq
306 aa
AA seq
DB search
MGFIAIDFETANDKKTSSCSIGLAVVENQEIVDTQHHLIQPFPNYYFDKNISIHGITPEM
TFDAPTFDNVWGDLSSLLTKYPLVAHNAGFDMNVLLSSLQVYGTHLPSISFFCSLVMARK
AFPGLPSYGLANLSRHFEIQLNHHNAESDAMASAIICIEMLKEHDCDSLDQLSNKFNHKI
GNVSSDNGYSSYGSGRPYKKRKEYGFSAPKNVDPKNRFYKKSVCFTGRLTEMNRKTAMQK
VVNIGGYVIPEQISPQTDFLVVGKQDYKKYGEGFKSTKIRHAEAYAEQGFPIFIMGENEF
LMSFDD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgggttttattgcaattgattttgaaacagcgaatgataaaaaaacaagttcttgctct
atcggtcttgctgtggttgaaaatcaagaaattgttgatacacaacatcaccttattcaa
ccttttccgaactactattttgataagaatatatcaattcatggtatcactccagagatg
acattcgatgcacctacatttgataacgtatggggtgatctttctagtttactgacaaaa
taccctctagtggcacataacgccggttttgatatgaatgtgttattaagttcattacaa
gtttatggaacacacctgccttccatttcttttttctgttcattggtaatggcaagaaaa
gccttccctggattacctagttatggacttgccaatctttccagacattttgagatacaa
ttgaaccatcataatgcagaaagcgacgcaatggcatctgcaattatttgtatcgaaatg
ctaaaagaacacgactgcgattcgctggatcaactaagcaataagttcaaccataaaatt
ggcaatgtttcttctgataatggctattcttcctacggaagtggtcgaccttacaagaag
agaaaagaatacggttttagtgcacccaaaaatgtagatcctaaaaacagattttacaag
aaatcggtatgctttacagggcggctaacggaaatgaatagaaaaacagccatgcagaaa
gtagtcaatataggggggtatgtgattcctgagcaaatttctccacaaacggatttttta
gtcgtaggtaaacaagattacaagaagtatggagaagggtttaagtcaacaaaaatacgt
catgcggaagcgtatgcagaacaagggtttcccatcttcattatgggagaaaatgagttt
ctgatgagtttcgatgattag
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