Flammeovirga sp. MY04: MY04_0889
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Entry
MY04_0889 CDS
T04442
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
flm
Flammeovirga sp. MY04
Pathway
flm03030
DNA replication
flm03430
Mismatch repair
flm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MY04_0889
03430 Mismatch repair
MY04_0889
03440 Homologous recombination
MY04_0889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flm03032
]
MY04_0889
03400 DNA repair and recombination proteins [BR:
flm03400
]
MY04_0889
Enzymes [BR:
flm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MY04_0889
DNA replication proteins [BR:
flm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MY04_0889
DNA repair and recombination proteins [BR:
flm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MY04_0889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_22
AAA_14
RuvB_N
Rad17
AAA_5
RCF1-5-like_lid
DNA_pol3_delta_C
AAA_30
AAA_7
AAA_2
AAA_16
AAA_18
RNA_helicase
TIP49
AAA_assoc_2
Mg_chelatase
AAA_24
nSTAND3
NTPase_1
VapE-like_dom
AAA_19
ResIII
DUF815
AAA_33
AAA_17
Motif
Other DBs
NCBI-ProteinID:
ANQ48271
LinkDB
All DBs
Position
1:complement(1109063..1110202)
Genome browser
AA seq
379 aa
AA seq
DB search
MENFVVSARKYRPNTFQTVVGQEHITNTLKNAVLSNHLAQAFLFCGPRGVGKTTNARILA
KTINCDNLSEKGDPCNECKSCTSFNQNSSLNIVELDAASNNSVEDIRNLIEQVRYAPQPG
KKKVYIIDEVHMLSTAAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFNRI
SVKDIVNQLQKIADEEGIKTDTDALHLIAQKADGGMRDALSMFDMIGTFSNNKEIDYQTT
VDNLHILDYDYYFKLTDFLNRGEASQAMLIFDEILRKGFDGHNFINGLCEHFRNILVCKD
EVTLELLDVSESVKQRYKQQAQEVPQSFIMTALNLGGECDTKYKESKNQRLHVELTLMKM
SHINRAIQLAQIEIKKKTS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggagaactttgttgtttcggctagaaaataccgtccgaatacctttcaaacagttgtt
ggacaagaacatatcacaaatacactaaagaatgctgtgttgagtaatcatcttgctcaa
gcgtttttgttttgtggtccaagaggtgtgggtaaaacaacaaatgccagaattctcgca
aaaacaatcaattgcgataatttatctgaaaaaggcgatccgtgtaacgagtgtaaatca
tgtaccagctttaatcaaaattcctctttaaatattgtggaattggatgctgcttctaac
aactcagttgaagacatcagaaatttgattgaacaagtaaggtacgctcctcagccaggt
aaaaagaaagtatatatcattgatgaggtgcatatgttatctactgctgccttcaatgcc
tttctaaaaactttagaggaacccccttcttatgctatcttcattttagcaactacagaa
aagcataaaatccttcctaccattctttcgagatgtcagatttttgattttaacagaatc
agtgtaaaagacatcgttaatcagctacaaaaaattgctgatgaagaaggtattaagacg
gatactgatgcacttcaccttattgctcaaaaagcagatggaggaatgagagatgcccta
tcgatgttcgatatgattggcactttctcgaataataaagaaattgattatcaaacaact
gttgataatttacatatcttagattatgattactactttaagctaactgatttccttaac
agaggtgaggcttctcaagccatgctcatctttgatgaaatccttagaaaaggctttgat
ggtcataattttattaatggtctttgtgaacactttagaaacatccttgtttgtaaagat
gaggtcacactggaactacttgatgtttctgaaagcgtaaaacaacgctacaaacaacaa
gcacaagaagttcctcagtcgtttattatgactgctctaaatttaggtggagaatgtgat
accaaatacaaggaatcaaagaaccaacgtttgcatgttgaattgacattaatgaaaatg
tctcatatcaatagagcgattcaacttgcacaaattgagataaaaaaaaagactagctga
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