Flammeovirga sp. MY04: MY04_0936
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Entry
MY04_0936 CDS
T04442
Symbol
scpA
Name
(GenBank) methylmalonyl-CoA mutase
KO
K01847
methylmalonyl-CoA mutase [EC:
5.4.99.2
]
Organism
flm
Flammeovirga sp. MY04
Pathway
flm00280
Valine, leucine and isoleucine degradation
flm00630
Glyoxylate and dicarboxylate metabolism
flm00640
Propanoate metabolism
flm00720
Other carbon fixation pathways
flm01100
Metabolic pathways
flm01120
Microbial metabolism in diverse environments
flm01200
Carbon metabolism
flm04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MY04_0936 (scpA)
00640 Propanoate metabolism
MY04_0936 (scpA)
09102 Energy metabolism
00720 Other carbon fixation pathways
MY04_0936 (scpA)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
MY04_0936 (scpA)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
MY04_0936 (scpA)
Enzymes [BR:
flm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.2 methylmalonyl-CoA mutase
MY04_0936 (scpA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MM_CoA_mutase
B12-binding
DUF7485
PhnI
RE_Eco29kI
Motif
Other DBs
NCBI-ProteinID:
ANQ48318
LinkDB
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Position
1:1165094..1167226
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AA seq
710 aa
AA seq
DB search
MKPDFSKIDLNNIQLTTPEKLVEDQNKWMTAEGIPVKKGFQEEDYSTAEHLNFAAGLPPF
LRGPYSAMYALRPWTIRQYAGFSTAEESNAFYKRNLAAGQKGLSVAFDLATHRGYDSDHP
RVVGDVGKAGVAIDSVEDMKVLFNDIPLDKMSVSMTMNGAVIPVLAFYIVAAEESGVSKD
KLSGTIQNDILKEFMVRNTYIYPPKPSMRIISDIFSYTSKNMPKYNSISISGYHMQEAGA
TADIELAYTLADGLEYIRAGIAAGLDIDDFAPRLSFFWAIGMNHFMEIAKMRAGRMLWAK
IVKQFGPKNPKSMALRTHSQTSGWSLSEQDPFNNVARTAIEAMGAALGHTQSLHTNALDE
AIALPTDFSARIARNTQLYIQDETNVCKVIDPWAGSHYVEYLTNEIAQKAWKLIEEVEEH
GGIAKAIEKGIPKMRIEEASARKQARIDSGQDTIVGVNKYLADEKTEIDVLEIDNTVVRE
GQIAGLKALRENRDQAKVEAAIKAIEVAAATGEGNLLELAVEAARCRASLGEISDAMEKD
FGRYKATIRNISGVYSHEVAGDKAFAEAKDLANQFEKLEGKRPRVMIAKMGQDGHDRGAK
VIATSFADIGFDVDMGPLFQTPEEVARQAAENDVDCVGASSLAAGHKTLIPQLIDELKRL
GRDDIMVFAGGVIPEQDYQFLYDSGVEAVFGPGTRVPYSAKTVLEILLKD
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccagatttttcaaaaatagatctaaataacattcaactaacaactccagaaaag
ttagttgaagatcaaaataaatggatgaccgctgaagggattccggttaaaaaaggcttc
caagaagaagattactcaactgcagagcacttaaattttgcagctggtcttcctccattc
ttaagaggaccttactctgcaatgtacgcgttacgtccatggactatccgtcaatatgca
ggtttctcaacagcagaggaatcaaatgcattctataaaagaaaccttgctgcaggtcag
aaaggtttatcagtagcatttgacttggctactcaccgtggttacgattcagaccaccca
agagtagttggtgatgtaggtaaagcaggtgttgctatcgactctgttgaggacatgaaa
gttttattcaatgatattccattggataaaatgtcagtttctatgacaatgaatggcgcc
gtgattccagttcttgcattctatattgtagctgcagaagagtcaggtgtttctaaagat
aaattgagtggtacaatccaaaatgatatccttaaggaattcatggtacgtaacacttat
atctaccctccaaaaccatcaatgagaattatttcggatatcttctcttatacttctaag
aacatgccgaaatataactcaatttctatctctggttatcacatgcaagaagcaggtgca
actgcagatattgagttagcatatacactagctgatggtttagagtatatccgtgcaggt
attgcagcgggattagatattgatgatttcgctccacgtctatcattcttctgggcaatt
ggtatgaaccacttcatggagattgctaagatgcgtgctggtcgtatgctttgggctaaa
attgtaaagcaattcggtcctaaaaatcctaagtcaatggctttgagaactcactctcaa
acttcaggttggtcattgtctgaacaagatccattcaacaacgttgcaagaactgcaatc
gaagcaatgggtgctgcacttggtcatactcaatcacttcacaccaacgcattggatgaa
gctattgcattacctacagatttctctgcacgtattgcaagaaacactcagctttacatc
caagacgaaacaaacgtatgtaaagttattgatccatgggcaggttctcactatgttgag
tacttaactaatgaaatcgctcaaaaagcttggaaacttatcgaagaagtagaagagcac
ggcggtatcgctaaagcgattgaaaaaggtattcctaagatgcgtatcgaggaagcctct
gctagaaagcaagctagaatcgactcaggtcaagatacaattgtaggtgtaaataagtat
cttgcagatgagaagactgaaattgatgttcttgaaatcgataacactgttgtaagagaa
ggtcaaattgcaggcttgaaagcgttaagagaaaatagagatcaagctaaagtagaagct
gcaatcaaagcaattgaagttgctgcagctacaggagaaggtaacttgttagaactagca
gtagaagctgcaagatgccgtgcatcccttggtgaaatttcagatgcaatggaaaaagat
tttggtagatacaaagcgactatccgtaatatctcaggagtttattctcatgaggtagct
ggagataaagcatttgctgaggcgaaagaccttgctaaccaattcgaaaagttagaaggt
aagcgtccaagagtaatgattgctaagatgggtcaagacggtcacgatagaggtgcaaaa
gtaattgccacttcatttgctgatatcggatttgacgttgatatgggaccattattccaa
acaccagaagaagtagctcgtcaagcagctgagaacgatgtggattgcgtaggtgcatct
tcattagcagctggtcacaaaacgttaattcctcaacttatcgatgagttaaaacgttta
ggtagagacgatattatggtatttgctggtggtgtaattcctgaacaagattatcaattc
ttgtacgattcaggtgttgaagccgtatttggtcctggtacccgtgttccttattcagct
aaaacagtattggaaatccttcttaaggattag
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