Flammeovirga sp. MY04: MY04_1154
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Entry
MY04_1154 CDS
T04442
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
flm
Flammeovirga sp. MY04
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flm03032
]
MY04_1154 (topA)
03400 DNA repair and recombination proteins [BR:
flm03400
]
MY04_1154 (topA)
Enzymes [BR:
flm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MY04_1154 (topA)
DNA replication proteins [BR:
flm03032
]
Prokaryotic type
DNA Topoisomerases
MY04_1154 (topA)
DNA repair and recombination proteins [BR:
flm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MY04_1154 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
ANQ48531
LinkDB
All DBs
Position
1:complement(1418114..1420525)
Genome browser
AA seq
803 aa
AA seq
DB search
MSRNLLIVESPAKAKTIEKYLGEGYTVRSSYGHVRDLKKGNDAIDVEKDFLPIYEVQSDK
KDVIRELKKLTKEAETVWLATDDDREGEAISWHLQEALNLKNKDTKRIVFREITKTAIQS
AIQKPRTIDIDLVNAQQARRILDRLVGFELSPVLWKKIQRGLSAGRVQSVAARLVVERER
EIEGFKPKDYYRVVANFDLGNNKSLEAELNTKFNTKEEAEKFLNDCLGDDFKISDIKTRP
GKKSPAPPFTTSTLQQEASRKLGYSVASTMSIAQRLYEAGHITYMRTDSLNLSQEAIQSA
TEEIADVYGDAYVQERHFKTSNKGAQEAHEAIRPTNFKNHKLKLEDNREARLYDLIWKRA
VASQMSDAQLERTTAEITTPKRTEKFTAKGEVIKFEGFLKAYIESNDDDDIEEDETTKGM
LPPLNVGQELPINVINATQRFTRPAARYTEASLVKTLEEKGIGRPSTYAPTISTIQKREY
VIKEARDGKERAYNQLTLSAGEIVSKDLNETYGAEKGKLFPTNMGMVVNDFLVKHFPKVV
DYSFTANVEEQFDEIAHGNMEWQNMLKNFYTPFHENVVDTEENADRAEAHAERELGIDPQ
SGKRVITRLGRFGPIVQIGEQDDEEKKFASLRKGQYLESITLEDALELFKLPRTLGKFED
KVVVAAIGRFGPYIRHDGKFVSLGKEYAPETVELDTAIELILAKREADAKKLIKTFEEEE
NLQLLNGRWGAYISYNKANIKIPKELKEKAAELTYEEVKKIIEEAPAPKTRGKAAAKKET
VAKKSTATKKKAPAKKKTAAKKK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaaaccttttaattgtcgagtcacctgcaaaggcaaagacaatagaaaaatac
ttaggcgaaggatatacagtaagatcaagctacggacacgttcgagatttaaagaaaggt
aacgatgccattgatgttgaaaaagactttttgcccatttatgaagtacagtctgataaa
aaagatgtaattcgtgagctgaaaaaattaactaaggaagcagaaactgtatggttagcg
accgatgatgaccgcgagggggaggctatttcttggcatttacaagaggcactcaattta
aaaaataaagacactaaaagaattgtctttagggaaattactaaaactgcgattcaatct
gcgatacaaaaacctcgtactattgatattgatttagttaatgctcaacaagctagaaga
attcttgaccgtttagtaggttttgaattatctccagtactttggaaaaaaattcaaaga
ggcctttcagcaggtagagtacaaagtgtagccgctcgtctcgttgttgaaagagaaaga
gaaatagaaggctttaagccaaaagactattatagagtagttgctaattttgatttaggt
aataataaatcattagaagctgagctgaatactaagtttaatactaaggaagaagcagag
aaatttttaaatgattgtttgggtgatgatttcaaaatttctgatatcaaaacacgtcca
ggtaaaaaatctcctgcacctccatttactacttccactttacaacaggaagcgagtaga
aaactaggttactcagtggcttcaactatgtctattgctcaacgattatatgaagctgga
catattacatatatgcgtaccgattctttaaatttatctcaagaagctattcaatcggct
acagaagagattgctgatgtttatggtgatgcatatgttcaagaaagacatttcaaaacg
tctaataaaggagcacaagaagctcacgaagccattagacctactaattttaaaaatcat
aaattaaaattagaagataatagagaggctagattatatgatttgatctggaaacgtgca
gttgcttctcaaatgtcagatgctcaattagaaaggactactgcagaaattactactcca
aaaagaactgagaagtttacagcaaaaggagaagtaattaagtttgaaggtttcttaaag
gcatatatcgaatcgaatgacgatgatgatattgaagaggatgaaactacaaaaggtatg
ttacctcctttgaatgttggtcaagaattgcctatcaatgtaattaatgctactcaaaga
tttactagaccagctgctagatatactgaagcaagcttagtaaaaacattggaagaaaaa
gggattggtcgtccatcaacttatgctcctacaatttcaactattcaaaaaagagaatat
gtgattaaggaagctagagatggaaaagaaagagcttataatcaattaactctctcagca
ggtgaaatcgtaagtaaggacctcaacgaaacttatggtgctgaaaaaggaaaactattc
ccaacaaatatgggtatggtagtaaatgatttccttgtgaaacatttccctaaagttgtg
gattattctttcacagcaaatgtagaggaacaatttgatgaaattgctcatggaaatatg
gagtggcaaaatatgctgaaaaacttctatactccattccatgaaaatgtagttgataca
gaggaaaatgctgatagagcagaggcacatgctgaaagagaattaggtattgatcctcaa
tcaggaaaaagagtcattactcgtttgggtagatttggtcctattgttcaaattggtgag
caagacgatgaggaaaagaagtttgcatcattaagaaaaggtcaatacttagagtctatt
actctagaagatgctcttgagctatttaaattacctagaactcttggtaaatttgaagat
aaagtagtagttgcagccattggtcgttttggaccttatattcgacacgatggtaaattt
gtttctttaggtaaagaatatgctccagaaacagtcgaattggatactgcaattgagctg
attttagcaaaaagagaagcagatgctaagaagttgatcaaaacatttgaagaagaagaa
aatcttcaattattaaatggtcgttggggtgcttatatttcttataataaggcaaatatt
aaaatccctaaagagttaaaggaaaaggctgctgaattaacttacgaagaagttaagaaa
atcatagaagaggcacctgctcctaaaactaggggtaaagctgctgctaagaaagagaca
gtagcaaagaaatccaccgccacaaaaaagaaagctcccgctaaaaagaagacagcggcg
aagaaaaaataa
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