Flammeovirga sp. MY04: MY04_1356
Help
Entry
MY04_1356 CDS
T04442
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
flm
Flammeovirga sp. MY04
Pathway
flm03030
DNA replication
flm03430
Mismatch repair
flm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MY04_1356
03430 Mismatch repair
MY04_1356
03440 Homologous recombination
MY04_1356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flm03032
]
MY04_1356
03400 DNA repair and recombination proteins [BR:
flm03400
]
MY04_1356
Enzymes [BR:
flm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MY04_1356
DNA replication proteins [BR:
flm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MY04_1356
DNA repair and recombination proteins [BR:
flm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MY04_1356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Gemini_AL3
DNA_pol_B_exo1
Motif
Other DBs
NCBI-ProteinID:
ANQ48732
LinkDB
All DBs
Position
1:1673934..1674737
Genome browser
AA seq
267 aa
AA seq
DB search
MNLNLKNPLVVFDLETTGTNVTKDRIIEISMVKADINGERTIKTYKCNPEMHIPSTSSKV
HGIYDEDVKDMPTFKQIAKEVAAFMKGCDIGGYNVLRFDLPVITEEFLRAGIEFDFSQRK
IVDAQKIFFMMEPRTLGAALKFYCGRELEDAHSAEADTIATLDVIDAQVKHYEGVTIKDK
NGKDYEPVKNDMNALHELTAKNLVDFAGRMVLNNEGDPIFNFGKYKGKSVADTLKKDPHY
YDWIINNDFALDTKNKLTQIRIKSQFQ
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaatttaaaaaaccccttagtagtatttgaccttgaaactacaggaacaaac
gttacaaaagatagaattattgaaatttctatggttaaggcggatataaatggagaaaga
accatcaaaacatataaatgtaacccagaaatgcatattcctagtacctcttctaaagta
catggcatatatgatgaagacgtaaaagatatgcctacctttaagcaaatcgcaaaagaa
gtagccgcttttatgaaaggttgtgacattggtggttataatgtgctaagatttgattta
cctgtgatcacagaagaatttcttagagcaggtatagaatttgattttagccaaagaaaa
atagttgatgctcaaaaaatcttctttatgatggagcctcgaactttaggtgctgcactt
aaattctattgtggaagagaattggaagatgctcattctgcagaagcagacactatcgct
actcttgatgtgatcgacgctcaagtaaaacattatgaaggggtaactatcaaagataaa
aacggaaaggattatgagcctgttaaaaatgatatgaatgcacttcatgaactgacagct
aaaaatttggttgattttgcaggtagaatggtactaaataacgaaggcgaccccattttt
aattttgggaaatataaaggtaaatcagtagcagatacattaaagaaagatccacattac
tatgattggataataaataatgactttgctttggatacaaaaaataaattgactcagatt
agaatcaaaagtcagtttcaataa
DBGET
integrated database retrieval system
