Flammeovirga sp. MY04: MY04_1495
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Entry
MY04_1495 CDS
T04442
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
flm
Flammeovirga sp. MY04
Pathway
flm03030
DNA replication
flm03410
Base excision repair
flm03420
Nucleotide excision repair
flm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MY04_1495 (polA)
03410 Base excision repair
MY04_1495 (polA)
03420 Nucleotide excision repair
MY04_1495 (polA)
03440 Homologous recombination
MY04_1495 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flm03032
]
MY04_1495 (polA)
03400 DNA repair and recombination proteins [BR:
flm03400
]
MY04_1495 (polA)
Enzymes [BR:
flm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MY04_1495 (polA)
DNA replication proteins [BR:
flm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MY04_1495 (polA)
DNA repair and recombination proteins [BR:
flm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MY04_1495 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MY04_1495 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Sipho_tail
HHH
Motif
Other DBs
NCBI-ProteinID:
ANQ48871
LinkDB
All DBs
Position
1:complement(1853994..1856786)
Genome browser
AA seq
930 aa
AA seq
DB search
MKKLFLLDGMALIFRAHFALIRNPRINSKGVNTSAPMGFVNSLLEILKKQEPTHIAVSFD
LSAPTFRHEMYKEYKANRQETPEDISIAIPIVKKIVDAFNIPRIEMEGFEADDVIGTIAK
KASAAGGFQTYMMTPDKDYAQLVDDNTFLYRPSTKGGIEILGPKEVLEKFDLDRVDQVID
LLGLQGDAVDNIPGVPGVGPKTACKLLKEYSTVEGIIENVDQLKGKLKERVSDNREQAIL
SKELATIKIDVPVEFNEEELKVKEPNKEELVKIFNDLEFKTLLKRVFPGEAPKKVAPKPG
EQTSLFGGGAPAAKAAPVEVVEEEIEIPIDTINSINKNYRMIDSEERYQELVDYLMKQKE
FAFDTETTSLDSLVAQPVGISFSAKKDEGYYVPLTLNEEEDQKILSHFKALFADEKILKI
GQNLKYDIQILDNVGVEVKGPFFDTMLAHYLIEPDKRHGMDTLSEHYLNYKPVSIETILG
KKGKKQKNMRDIPASEVYEYACEDADITLQLKYALADQLKEKEAETLFNNLEMPLMETLR
LMEKEGVNLNVPSLETYSVTLAEEIVQLEKDIYALAGEEFTISSPKQLGIVLFEKMKLVD
KPKKTKTGQYATGEEILQGLKQHEIVGKILDFRQLNKLKSTYVDALPKLIKEDGRVHTTY
NQAVAATGRLSSTDPNLQNIPIRSSRGKEIRKAFVARDEDHVFMAVDYSQVELRIMAAFS
NDEEMINAFKAKKDIHTATAAKVFKVAEEEVDADMRRKAKTANFGIIYGVSAFGLSQQLD
IPRTEAKQLIDAYFEEFPAVKKYMDDVINKAREDEYVVTLMGRRRYLRDINSRNFTVRGM
AERNAINAPIQGTAADIIKKAMIDIQKWMDTQDLKSKMIMQVHDELIFDVHKDELDIMKS
KIKELMENAYEMKVPLEVEVGEGLNWLEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattatttctgcttgatggcatggctttgatcttccgtgctcactttgcgtta
attcgtaatcctaggatcaactctaaaggagtaaatacaagtgccccaatgggatttgtc
aactccttattggaaattctaaaaaagcaggaacctacacatatagccgtttctttcgat
ttatctgcgccaacatttcgtcatgagatgtacaaagagtacaaggcaaaccgtcaggaa
acacctgaagatatatctatcgccattcctattgtaaagaaaatcgtcgacgcttttaat
atccctcgaatcgaaatggaaggttttgaagcagatgatgtgattggaacaattgctaaa
aaagcatctgccgcgggaggttttcaaacctatatgatgacacccgataaagattatgct
cagttggtagatgataatactttcctttaccgtccatctacaaaaggtggaattgaaatt
ctagggcccaaagaggtattagagaaattcgatctagatagagtagatcaggtaattgac
cttttaggtttacaaggtgatgcagtcgataacattccaggtgttccgggggtaggaccg
aagacggcatgtaaacttcttaaagaatattctactgttgaaggcattattgaaaatgta
gatcaactaaagggtaagcttaaagaaagagtatctgataatcgtgaacaagccattcta
tcaaaagaattagcgacgattaagattgatgttccggtagaattcaatgaagaggaattg
aaagtaaaagaaccaaacaaagaagagttggtaaagattttcaatgatcttgagtttaaa
actttattgaaaagagtgttcccaggtgaggcaccaaaaaaggtggctccaaagccgggt
gaacaaacatctttgtttggaggtggagctcctgctgcaaaagcggctccagtagaagta
gtggaggaagagatcgaaattcctattgatacaattaattctatcaataaaaattacaga
atgatcgattctgaggagagatatcaagaactcgtagattacttgatgaaacaaaaggaa
ttcgctttcgatactgaaacgacttctctagattcattagtggctcaacccgttggtatt
tcattctccgctaaaaaagatgaaggttattatgtgcctttaactttaaacgaagaggaa
gatcaaaaaatcttatctcactttaaagcactttttgcagatgagaagattttgaaaatt
ggtcagaatcttaaatatgatattcaaattttagataatgtaggtgtagaggtcaaagga
cccttcttcgatacgatgttggcacattacttaattgagccagataaacgacatggtatg
gatacgttatcagagcattatttaaattataagcctgtttctatcgaaactattctaggt
aaaaaagggaagaaacagaaaaatatgagagatatccctgcttcagaagtatatgaatat
gcttgtgaagatgcagatatcacgctacagttgaaatatgctttagcagatcaactcaaa
gaaaaagaagcagaaacgttattcaacaatcttgaaatgccattgatggaaacattgaga
ttgatggaaaaagaaggagttaacttaaatgttccttctcttgaaacatattctgtgacc
ttggcggaagaaatcgttcaattggaaaaagatatttatgcactagctggagaggaattt
actatttcttcaccaaaacagttgggtattgtcttattcgaaaaaatgaagttggtcgat
aagccgaagaagaccaagacagggcaatatgccactggggaggagatccttcaaggtttg
aaacaacatgaaatcgttggtaaaatcttagacttccgtcagttaaacaaactgaagagt
acgtatgtagatgcacttcctaagttgatcaaagaggatggtagagtgcatacaacgtac
aatcaagccgtagcagctactgggcgtttaagttcgacagatcccaacttacagaatatt
ccaattcgttcatcaagaggtaaggagattagaaaagcctttgttgctcgagatgaagat
catgtatttatggctgtcgattattctcaagtagaacttcgaattatggctgccttcagt
aacgatgaggaaatgatcaatgcatttaaagcgaaaaaagatattcacacagcaaccgca
gcaaaagtctttaaagtagctgaagaagaagtggatgcagatatgagacgtaaagctaaa
acagctaactttggtattatatacggagtttcagcttttggtttatctcaacaattggac
atcccgcgtacagaagcaaaacaattgatcgatgcttattttgaggaattccctgctgtg
aaaaaatacatggacgatgtgatcaataaagcacgtgaggacgagtatgtagtcactttg
atgggtcgtagaagatatttaagagatatcaactcaagaaactttacggtgagaggtatg
gctgaacgaaatgcgattaacgctccaattcaaggtacagcagccgatatcattaagaag
gcgatgattgatattcaaaaatggatggatacacaagacttgaaatccaaaatgatcatg
caagtgcatgatgaattaatttttgatgttcataaagacgaattggacataatgaaatca
aaaattaaagagctgatggaaaatgcctacgaaatgaaagttccattggaagtagaagta
ggtgaaggtttaaattggttagaagcacattaa
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