Flammeovirga sp. MY04: MY04_1769
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Entry
MY04_1769 CDS
T04442
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
flm
Flammeovirga sp. MY04
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
flm03016
]
MY04_1769
Enzymes [BR:
flm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
MY04_1769
Transfer RNA biogenesis [BR:
flm03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
MY04_1769
Prokaryotic type
MY04_1769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
ANQ49143
LinkDB
All DBs
Position
1:2202192..2203109
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AA seq
305 aa
AA seq
DB search
MSFEITILGSSAAIPSKGRQMTSQHLRIGNQQFLIDCGEATQHQLLNFGISLHKIEHIFI
SHLHGDHFFGLPGLLSTMHLQRRTEPLYIHGPRGLDEVLLASFKHSKTELNYKVFLYDNP
TMFSEVIFENEKITVETIPLTHRVPCTGFLFREKKKQYRIIPEKLPSGLPFEVFRALKRG
ENIEFNGDTIRYEDVTLPPRKSRSYAFCSDTKYSKSVISKVYGVDLLYHESTFMDRHKER
ANITYHTTAKQAGSVAKEAKVKELLIGHFSARYADLTELLEEAQTEFNNTQLAIEGQKFS
IVESD
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
ttgtcattcgagattactatattaggttctagtgccgcaattccatcgaaaggccgacaa
atgacttctcagcatttacgaattggtaaccagcagtttttaattgattgtggtgaagca
acacaacatcagttattaaactttggcatcagtttgcataaaattgagcatatttttatc
agtcatttacatggcgatcatttctttggtttaccaggattattatccacaatgcatctg
caaagacgtacagagcctttgtatatccatggcccaagaggtttagacgaagttttattg
gccagtttcaagcactcaaaaacagaattaaactacaaagtttttctatacgacaatcct
acaatgttttcagaggtgatctttgaaaatgaaaaaattactgtagaaactattcctttg
actcatagagtcccttgtacaggattcctattcagagagaagaaaaagcaataccgaatt
attcctgaaaaacttccatctggacttccttttgaagtttttagagctctaaaacgtgga
gaaaatattgaatttaacggagatactattcgctatgaagatgtaacgttacctccaaga
aaatcaagatcatatgcgttttgttcggataccaaatattctaaaagtgtgatctctaaa
gtctatggtgtagacttgctttatcatgaatctacttttatggatagacataaagaaaga
gcgaatatcacctatcataccacagcgaaacaagccggttcagtagccaaagaagccaaa
gtaaaagaacttttaattggtcatttttcggcacgctacgctgacttaacagaactttta
gaagaggcacaaacagaatttaacaatacgcaactcgccatcgaaggtcagaagttttct
attgtggaatctgactaa
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