Flammeovirga sp. MY04: MY04_1780
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Entry
MY04_1780 CDS
T04442
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
flm
Flammeovirga sp. MY04
Pathway
flm00470
D-Amino acid metabolism
flm00550
Peptidoglycan biosynthesis
flm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MY04_1780 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MY04_1780 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
flm01011
]
MY04_1780 (murD)
Enzymes [BR:
flm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
MY04_1780 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
flm01011
]
Precursor biosynthesis
Amino acid ligase
MY04_1780 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD_N
MurD-like_N
Pyr_redox_3
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
ANQ49154
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All DBs
Position
1:2215444..2216748
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AA seq
434 aa
AA seq
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MKDKLLVLGAGESGIGAALLALSKGFDVFVSDFGKISEEQKKTLKTHSIPFEEGSHDKAP
RNPKIVVKSPGIPDTVPIIKELKANNAKIYSEIEFAYQYTDAKIIAITGTNGKTTTTKLI
YHLLKESGFNVGLAGNIGISFAKEVLENDYDWYVLEISSFQLDDIETFAPDISLILNITP
DHLDRYNFDINQYADSKFRIIENMSMKGSFIYSEDDQNIKKHLSKRNIKPWAIGFDHTFF
EQGKLTIPFKGDSYSFNHLPLKGPHNEWNMSAAILAALSAGVSPEDIQDALPSFVGEPHR
LQFVKEVNHIKYINDSKATNVEAAFFALQSFDTPIVWIAGGTDKGNDYSMLHDAVERRVK
SIICLGTDNSKLLAAFGDQKVMIETQSMEEAISLATNAADTGEVVLLSPACASFDLFKNY
MDRGDHFIEAVQKL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataagttgttggtacttggtgccggtgaaagtggaattggagctgcactactc
gcattatcaaaaggttttgatgtttttgtttctgattttggaaaaatttctgaagaacaa
aaaaaaacacttaaaactcattcaattccattcgaagaagggtctcatgataaagcacca
aggaatcctaaaattgtggtaaaatccccaggcattcctgatactgttcctatcataaaa
gagttgaaggcgaataatgcaaaaatctattctgaaattgagtttgcctatcaatataca
gatgccaagattattgcaattacaggtacaaatggaaaaacaactaccacaaaacttatc
tatcatttattaaaggaaagtggttttaatgttggtttagctggaaatattggaattagt
ttcgccaaagaagttctagagaacgactatgattggtatgtattagaaattagtagtttc
caattggatgatatcgaaactttcgctcccgatatttctttaattcttaacattactccc
gatcatttagatcgttataattttgatatcaatcaatatgctgattctaaattcagaatt
attgaaaatatgtcgatgaaaggtagttttatctacagtgaagacgatcagaatatcaaa
aaacatctaagtaagagaaatataaagccttgggccatcggttttgatcacacattcttt
gaacaaggaaaattaactattccatttaaaggagatagttattcctttaatcatttacct
ctaaaggggccacataacgaatggaacatgagtgctgcaattctagctgcactatctgct
ggagtttctcctgaagatattcaagatgcattaccatcttttgttggagaacctcaccga
ttgcaatttgtcaaagaagtcaatcatattaaatatatcaatgattccaaggctacaaat
gtagaagccgcattctttgcgttacaatcttttgatacgcctattgtttggattgcaggt
ggtactgataaaggcaatgattacagtatgttacacgatgcagtcgaaagaagagtgaaa
tctattatatgtttaggaactgataatagtaaattattggctgcttttggagatcaaaaa
gtaatgattgaaacccaaagtatggaagaagcaatatcgctagcaacaaatgctgcagat
actggagaggtagttttattatctcctgcttgtgcaagtttcgacctatttaagaattac
atggatagaggggatcattttattgaggccgttcagaaattataa
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