Flammeovirga sp. MY04: MY04_1944
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Entry
MY04_1944 CDS
T04442
Name
(GenBank) AAA family ATPase
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
flm
Flammeovirga sp. MY04
Pathway
flm03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MY04_1944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flm03032
]
MY04_1944
Enzymes [BR:
flm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
MY04_1944
DNA replication proteins [BR:
flm03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
MY04_1944
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
MY04_1944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
AAA_30
UvrD-helicase
Dna2
ResIII
PDDEXK_1
AAA_22
PhoH
DEAD
Helicase_RecD
AAA_16
AAA_7
SLFN-g3_helicase
nSTAND3
Terminase_6N
AAA_6
Motif
Other DBs
NCBI-ProteinID:
ANQ49318
LinkDB
All DBs
Position
1:2424283..2427708
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AA seq
1141 aa
AA seq
DB search
MLKAEDYYQYLSQQIEDDSYSNLEKHHKIKDLLEWICKEETKGEKVLLSSLFSRIAFISQ
KKKLPELLSWRLQKIRINDRQSKRSTKFISDHDVQFAARGVAELIKEVHGVIIPEKLDHS
LPELPSEELVNRHKENTIEVLKVEVLRIDTDHNRIICLEDDEENETTAPLEVRFNVSGYN
DIYTAFIHKLWENAQLLLINARMEEDDSVSPQHFVLEPDYLIDVTAVAECFSRNTTIPLM
HLLKKFSTSTSSSAMLLGNVANYFLDEAIHSEDTDILDFRDVFTKTFKASPLEYITLDEL
QTKDGFNTFMKKAEDQFNNIKRTIKEDFLQQNIYKDGCIIEPSFYSPKYGLQGRLDLLHI
NQHQKEFRIVELKSGTPPQVGFGNSGLWINHQVQTLMYQMILRDAYNVESKQVFPYIFYS
KTIQSPLRFDTFTLKLEQSILLTRNEIVLNELKLSKAETLQEVHKVICQLNESAFAGAPP
FTKTEVNEFIRNLKGLNRMEKAYLYAFTSFISKEQQLSKVGDTIFNQGAAALWKDDFEEK
KDSFKIFFDLEVTGNYANEPVPELIFKRTNEENAFVNFRVGDIVTIYPRQSADTIPTQGQ
INRGTITFISNSEVRVQLRHRQRNSEIYDADTKWALEGDFIEASFNSMYRGIFNFISWEN
KEKKARLLGLNPPKYPDKMYTHEEVKSLAQDKNLNETELSTLSKALSTEDYCLVVGPPGT
GKTSRMLKNLAHILHKTDKTRNILFVAYTNRAVDEICEALDEAIETPLEDGRKFLRIGSE
HSCSPQWKENLMHNLAQNANNRKMLRNGIEQHRIFVSTLASIAGRSSLFKIKQFDMAVID
EASQILEPQIVSLLTKVNRFVLIGDQKQLPAITQQDPVLSEIDFEELKEIGLTDRRTAYF
ERIYALCQKNNWHWAFDRLKNQGRMHEVLGNFANQQFYQGNLTTVPLPWQSASFEWDQLP
EYSDLEKLLVERRLLFFPTTGKNTSTSDKINMEEARKIAKVAVATRKRYLEQKGSFDIDK
TLGIIAPYRNQIAAIRQALEEEGFEDAHLLSIDTVERYQGSQREVILISFCANTPFQLEG
MISLTSDHKVDRKLNVAITRAKQQMIFFGNPYILMRSSIHESLMNWVRDQKGWIDNDNLL
F
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaggcagaagattattatcagtatttatcacaacaaatagaagacgattcttac
tccaacttagagaaacaccacaaaatcaaagatttactggaatggatttgtaaagaagag
accaaaggagaaaaagtgttattatccagccttttctcacgaattgcctttatcagtcag
aaaaaaaagctgcctgaattgctgagttggcggttacaaaaaatccgtatcaacgatagg
caatccaaaagatctaccaaatttatttcagatcacgatgtacaatttgcggcaagaggt
gttgccgagttaatcaaggaagtacatggtgttatcataccagaaaaattagaccattcc
ttaccggaattaccttccgaagaattggtcaacagacataaggaaaataccattgaagta
ttaaaagttgaagttttaagaattgatacagatcataaccgcatcatatgtctggaagat
gatgaggagaacgaaactactgcccctttagaagttcgatttaacgtttctggttataac
gatatttataccgcatttatccataaactttgggaaaatgcacagttactgttgatcaat
gcacgcatggaggaagatgatagtgtttctccacaacattttgttttagagcccgattac
cttattgatgtaacggctgtagctgaatgttttagtagaaatacgaccattcctttgatg
caccttttgaagaaattctcgacttcaacaagttcttctgctatgttattgggtaacgta
gctaactattttttagacgaggccatacattcagaggatactgatatactcgattttaga
gatgtatttacgaaaacgtttaaagcgagtccattggaatatatcactttagacgagctt
cagaccaaagacggttttaatacgttcatgaagaaagctgaggatcagtttaacaatatc
aaaaggacgattaaagaagattttctacagcagaatatttataaagacgggtgcattatt
gaaccttccttctattctcctaagtatggattgcaaggtcgattggacttgttgcacatc
aatcaacatcaaaaagaatttaggattgttgaattaaaatcgggaactcctcctcaagtt
ggttttggcaactcgggtctttggatcaatcatcaagtacaaactttgatgtatcagatg
atattaagagatgcttataatgtagaaagtaagcaagtcttcccctatattttctattcg
aaaaccattcaatcccccctacgatttgataccttcactttaaaattggaacaaagcatt
ttgctgacaaggaatgagattgttctaaacgaattgaagctatccaaagctgaaacttta
caagaagtgcataaagtgatttgtcagttaaacgaatctgcttttgcaggggcacctcca
tttaccaagacagaagttaacgaattcattcgaaatcttaagggattgaatcgaatggaa
aaggcgtatttatatgcttttacgagctttatttcgaaagagcaacaattgtcgaaagtt
ggggatacgatctttaatcagggagcagctgccttgtggaaagacgatttcgaggaaaag
aaagatagtttcaaaatattctttgatcttgaggtaaccggcaattatgccaacgaacct
gtgcctgaactcatctttaaacgtaccaatgaggagaatgcatttgtcaactttagagtg
ggcgatatcgtaacgatttatcctagacaaagtgcagataccattcccactcaaggtcag
attaacagaggaaccatcacgtttatatcaaatagtgaggtgagagtacagttaagacac
cgacaaagaaactcagaaatttatgatgctgataccaagtgggctttggaaggcgacttt
attgaagcatcatttaattcgatgtatagaggaattttcaattttatcagttgggaaaat
aaggaaaagaaagcacgtttactgggcttaaatcctccaaaatatcctgataaaatgtac
actcatgaggaagtgaaatcgcttgctcaggataaaaacttaaacgaaacagagctatcg
accttatcaaaagcattgtcaacagaagattattgtttggtcgttggccctcctggtaca
gggaaaacttctcgtatgctgaagaacttggctcatattcttcataaaacggataaaaca
agaaatatactttttgtggcttataccaatcgtgcggtagatgaaatttgtgaagcattg
gatgaagcgattgaaacacctttggaagatggacgaaaattcctgcgtattggatctgaa
cattcttgttctccacaatggaaggaaaatttgatgcacaacttggctcaaaatgctaac
aatagaaagatgttgagaaatggtatcgagcaacatcgcatatttgtctcgactttagct
tctattgcaggtagatcgtctcttttcaaaatcaaacaatttgatatggcggtgatcgat
gaggcttcgcagattctggaacctcagattgtaagtcttttaactaaagtcaatcgattt
gtattgattggcgatcaaaagcaattaccggccatcactcagcaagatcctgtcctttct
gaaattgactttgaagagttgaaggaaattggtctaaccgatagaagaaccgcctatttt
gaacgtatttatgctttatgtcagaaaaacaattggcactgggcatttgataggttgaag
aatcaaggacgtatgcacgaagttctagggaattttgccaaccaacagttttatcaagga
aatcttacgactgttcccctgccctggcaaagtgcttcttttgagtgggatcaactccct
gaatattctgatttagaaaagttattggtcgaacgtcgcttgctattctttcctacaaca
ggaaaaaacacctctacttccgacaagatcaatatggaagaagcaaggaaaattgccaaa
gtagccgtggcgactagaaagcgttaccttgagcaaaaaggaagctttgatattgataaa
acattaggaattatcgccccctaccgaaatcagatagccgctatccgacaagcattggaa
gaggaaggatttgaggatgcacacttattgagtattgacactgtagaacgctaccaagga
tctcaaagagaggtcattctgatttctttctgtgccaacaccccttttcaattggaaggt
atgatcagtttaacgtctgatcataaagttgatcgaaaattgaatgtggcgattacccga
gcaaaacagcaaatgatcttctttggtaatccatatattttgatgagatcttctattcat
gaatcgttaatgaactgggttcgagatcaaaagggttggattgataacgataacctatta
ttttag
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