Flammeovirga sp. MY04: MY04_1957
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Entry
MY04_1957 CDS
T04442
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
flm
Flammeovirga sp. MY04
Pathway
flm00300
Lysine biosynthesis
flm00470
D-Amino acid metabolism
flm00550
Peptidoglycan biosynthesis
flm01100
Metabolic pathways
flm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MY04_1957
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MY04_1957
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MY04_1957
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
MY04_1957
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
flm01011
]
MY04_1957
Enzymes [BR:
flm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
MY04_1957
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
MY04_1957
Peptidoglycan biosynthesis and degradation proteins [BR:
flm01011
]
Precursor biosynthesis
Amino acid ligase
MY04_1957
Racemase
MY04_1957
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
ANQ49331
LinkDB
All DBs
Position
1:2445950..2448388
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AA seq
812 aa
AA seq
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MSTNTSIDFSSSFWNAKYLLIDSRMLTAPSQTIFFALNGPKREGSEFIRELYDKGVRKFV
VTVDFDKGYLYKEATFVYVENTLQTLQEVTKYHRELFPDLPVIGITGSNAKTIIKEWLYT
LLEVDKNVVKSPKSYNSQIGVPLSVWQIDKKHELGIFEAGISKVDEMKNLQRIILPTIGL
FTNLGSAHDKLFDNRTQKLHEKGFLFDECQTIIYCRDHEDIHEELRQKKGELFHWGVHQE
AALRIEEIENQLVFLNFKGNKHQITIPFNDEASFENAMHCVAVLTYLGYSFKEINSRLSF
LKSLPMRLERKEGINGTVLINDFYNNDLGGLQIALSFMGQNQENLPKTLILSDLLQGHND
KTILYQKINELIHEHEIERFIGVGNHLSQHQNDITIDSQFFDNTSELKNAIRKQEITFNK
EMILLKGARQYEFEKIAALLQRKIHSTRLEINLDAVVHNLMFYKAQLQPSTKVMVMVKAL
GYGSGKHELAHTLQYHLVDYLGVAFADEGVELRENGIRTPIMVLTPSPDSFETMRRFQLE
PEIYNLEMLEALEDFLEEDENDTPFAIQINIDTGMHRLGFTAAELPILLEKLGKIASKVK
VTGVFTHLAGADEEQHNNYTLNQVKEFDKVAASIEDFLGYKVIKHCLNSAGIVRFPEHQM
DMVRLGIGLHGIEVNHIKQDDLQTVATLKSVIAQIKTIKKGETIGYGRKGVASKDMKIAT
IGIGYADGFNRHFSNGVGKMIINGKIAPVIGNVCMDMSMVDITDINAVVGDDVVIFGEDL
SITQLAKAIDTIPYEILTSVSSRVKRVYYMEG
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaaacacaagtatcgatttttcttcttctttttggaacgcaaagtatctactt
attgatagtagaatgcttaccgctccatctcaaaccatcttttttgctttaaatgggcct
aaaagagaaggaagtgaatttatacgtgagttgtatgataaaggagtgagaaagtttgtg
gtcacggtagatttcgacaaaggttacctgtataaagaggcaacgtttgtctatgtggaa
aataccctacaaactttacaagaagttactaaataccatagagaactatttccagatctt
ccagtaattggtatcaccggatcgaatgctaaaacgatcattaaggaatggttgtacacg
ttattggaagtggataaaaatgtggtcaaaagtcctaagagttataactctcaaatcgga
gtacctttatcggtttggcaaattgataaaaagcacgaattaggcatttttgaggccggg
atttctaaggttgatgaaatgaaaaaccttcagcgaattattcttcctacgataggttta
tttaccaatttgggttctgctcacgataaattatttgataatagaacgcagaaacttcat
gaaaaaggttttctttttgatgagtgccaaaccatcatttattgtcgtgatcatgaagat
attcacgaggaacttcgacaaaaaaaaggggaattatttcattggggagtgcatcaagaa
gctgccttgaggattgaggaaattgaaaaccaattggtcttcctcaacttcaaagggaat
aagcatcaaataactattccatttaacgatgaggcttcattcgaaaatgccatgcactgt
gtggctgtgttgacttatcttggctattcatttaaggaaatcaacagtcgtttatccttc
cttaaaagtcttccgatgagattggagagaaaagaaggaataaatggcactgttctcatc
aacgatttttacaataacgatttaggaggtttgcagattgcgttaagctttatggggcaa
aatcaagaaaacttgcctaaaacgcttattctatccgatcttctgcaaggacataatgat
aaaacgattttgtatcaaaaaattaatgagttgatacatgagcatgaaattgaacgtttt
atcggggtgggaaatcacttaagtcaacatcaaaatgatatcacgattgatagtcagttt
ttcgataatacctctgagttaaagaatgcaataagaaagcaggaaatcactttcaataaa
gaaatgattcttttgaaaggagcacgtcaatatgaatttgaaaaaattgcggctctgctt
caaagaaagatacatagtactcgattagagatcaacttggatgctgtggtgcataatctc
atgttctataaagcacaacttcaaccttcaactaaagtgatggtgatggtgaaagcttta
ggttatggtagtggaaagcacgaattagcccatacgctacaatatcatttggtggattat
ttgggagttgcttttgctgatgaaggggtagaattaagagaaaatggtatccgtacacca
attatggtactaacaccttcgcccgattcttttgaaaccatgcgtcgttttcaactagaa
cctgagatctataacctagaaatgttggaagctttagaagactttctagaggaagacgaa
aatgatactccttttgctattcaaatcaatatagatacaggaatgcaccgacttggattt
acagccgctgaattgcctattttattagaaaaattaggaaaaatagcctcaaaagtaaaa
gtgactggtgtatttacacatttggctggtgccgatgaggaacagcacaataattatact
ttaaatcaagtaaaagaatttgataaagtggccgcttctattgaagattttcttggctat
aaagtgataaaacactgcttgaactctgctggaattgttcgctttcctgaacatcaaatg
gatatggtacgacttggaattggcctgcacggtattgaagtgaatcatatcaaacaggat
gatcttcagacggtggctactctaaaatctgtaattgctcagatcaaaaccatcaaaaag
ggagaaacgattggctatggacgaaaaggtgtcgcttcaaaagatatgaagattgctacg
attggtattggctatgccgatggctttaaccgacactttagcaatggggtgggtaaaatg
atcatcaatggaaagattgctcccgtcattggtaatgtgtgcatggacatgagcatggta
gatattaccgatatcaatgctgtagtgggtgatgatgttgttatttttggagaagatcta
agcatcacacaattggcaaaagcgattgatacgatcccatacgagatacttacttctgtt
agttctagagtgaagagggtctattatatggagggataa
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