Flammeovirga sp. MY04: MY04_2062
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Entry
MY04_2062 CDS
T04442
Name
(GenBank) D-alanine--D-alanine ligase
Organism
flm
Flammeovirga sp. MY04
Pathway
flm00470
D-Amino acid metabolism
flm00550
Peptidoglycan biosynthesis
flm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MY04_2062
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MY04_2062
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
MY04_2062
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp
RimK
Reov_VP3_GTase
DUF7026
Motif
Other DBs
NCBI-ProteinID:
ANQ49436
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Position
1:complement(2558164..2560875)
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AA seq
903 aa
AA seq
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MMKIGIFFGGISREREISFAGGRTVYDNLDKQLFEPVPIFVDSLGNFIHLDWSFVYKGTV
RDFYPPVPSVPANLSGFQMYVESLGKLSEEQLNEMASLVGQRVKPDDFGQLFDFAFLALH
GPYGEDGNLQGLLEWYGIPYSGAGVLSSAIGIDKITQKKLFSDLGLVTPDYRVIDANDLT
EDQVATTFTSLKEALGMPLVVKAPRQGSSLGVSIVKEDSVEAFQAAAKKSLFIEEVKREQ
WISLSDEDKMRFVHDFVDVRLGIGLPVYVNGDSEKILYNPKELYDHLASELEEKGNDMVS
YQSLDAEERLLIEQHVKGREFSCIVVEDEDAQPLALPPTEIVRGNEGVFDYRSKYLPGMS
RKVTPIDLPIEKVREIQSKCEELYTKLQFDVYARIDGFVTESGEVFLNDPNTTSGMMPSS
FFFHQAAEIGLNPSQFLTFIIRTSLACRIRSGKNTVVTKPLLKELDQQIAQLSSDDQQKR
RVGVIMGGYSSERHISVESGRNIYEKLASSHKYEAIPIFLTGSNEHHEIYELPINIMLKD
NADDIKLKIEQALSGEKHEVLTEAIQKASKITDKYAAGACFDPKPLNYDTLKERVDAVFI
ALHGRPGEDGAVQKHLNEKGIPYNGSDVDSSEITIDKFATTEILGEKEVFVAEHMLLQKA
DWQNDAKAAIDEVESKFNYPLIAKPADDGCSSAVVMVKNRNTLEFFAEAMFRNEEEVAED
LRNKLHLDKNEEFPSKQKILIEELISAKDADHFLEITGGMLTKWHEDGTRTYEVFEPSEA
LASGEILSLEEKFLAGEGQNITPPRFSPDADEQKWISDAVRKDLENVAKILNVQGYCRID
AFVRIWKEEKRVETIIIEVNSLPGMTPATCIFHQAAINGYKPYDFIDNILEYGRQRTEAK
LSR
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaataggaatttttttcggaggtatttcacgagaacgtgaaatctcatttgca
ggaggtagaacagtttatgataacttagacaaacaattgttcgaacctgttccaatattt
gttgatagtttaggtaacttcattcatctagattggagttttgtatataaaggtactgta
cgtgatttttatccgccagtaccaagtgttcctgctaatttatcgggcttccaaatgtat
gtggaatctctaggtaagttatcagaagaacaattaaatgaaatggctagtttggttggg
caacgtgttaagcccgacgatttcggtcaattatttgattttgctttcttggcattacac
ggtccctacggagaggatggtaaccttcaaggtttattggagtggtacggtattccttat
tctggtgcaggtgtgttgtcttctgcaattggtattgacaagattactcagaagaaatta
ttctctgaccttggtttggtgacaccagattatagagtaatcgatgcaaacgatttaaca
gaagatcaagtagcaacaacttttacttctcttaaggaagctttaggaatgccattagtg
gtgaaagcaccaagacaaggttcttctttaggtgtgagtattgtgaaagaggatagcgtt
gaagctttccaagcagcagctaaaaaatcattatttatagaggaggtaaaacgtgaacaa
tggatttctttatctgatgaagataaaatgcgttttgttcatgattttgtcgatgtgcga
ttgggtatcggtcttcctgtttatgtaaacggtgatagcgaaaagatactttacaatcca
aaagaactatatgatcatcttgcttctgaattagaagagaaagggaatgatatggtgagt
tatcaatcactggatgctgaagagcgtctattgattgagcaacatgtgaagggaagagaa
ttctcctgcattgttgtagaagatgaagatgctcaacctttggcattgccacctacagag
attgttcgtggtaacgagggagtatttgattaccgttcgaaataccttccaggtatgagt
agaaaagtgacgccaattgatcttcctattgaaaaggtgagagaaatccaatcgaaatgt
gaagagttgtacaccaaactacaatttgatgtatatgctagaattgatggattcgtaact
gaaagcggtgaggtatttttaaatgacccgaatacgacttcaggtatgatgccttcatca
ttcttcttccatcaagcagctgaaattggactgaatccatctcaattccttacgttcatc
atcagaacatctttggcttgtagaattcgctcgggtaagaatacggtcgttactaaaccg
ttattaaaagagttggatcagcagattgctcagttgtcatcagacgatcaacaaaaaagg
agagtaggtgtgattatgggtggttactcatccgaacgtcacatttctgttgaaagtggt
agaaacatctatgagaagttggcttcttcacataaatatgaggcgatccctattttcttg
acaggaagtaatgagcatcatgagatctatgaattgccgatcaatatcatgttgaaagat
aatgcggatgatatcaaattaaagattgaacaagcattatcgggagagaagcatgaagta
ttgacggaagcaattcaaaaagcatcaaaaattactgataaatatgctgcaggtgcatgt
tttgatcctaagcctttaaattatgatactttaaaggaaagagtagatgcagtatttatt
gccttgcatggtcgcccaggtgaagatggagcggtacagaaacatctgaacgaaaaaggt
attccttacaatggttctgatgtagatagctctgaaattactattgataaatttgccact
acagaaattcttggtgaaaaagaagtgtttgtggctgaacatatgttgttgcaaaaggca
gattggcaaaatgatgctaaagcagcgatcgatgaagtggaatctaaatttaattatcca
cttatcgctaagcctgccgatgatggctgttcttctgcagtggtgatggtgaagaataga
aatacattagaattctttgctgaagccatgttcagaaatgaagaagaggtagccgaagat
ttaagaaataaattacaccttgataaaaatgaggaattcccaagtaagcagaaaatctta
attgaggagttgataagtgcgaaagatgcggatcatttcttagagatcacaggtggtatg
ttaacaaagtggcatgaagatggcactcgtacatacgaagtgtttgaaccatccgaagct
ttagcaagtggtgaaatattatcgcttgaagaaaaattcttagcaggagaaggacaaaac
attactccaccaagattttctcctgatgctgatgagcaaaaatggatctctgatgcagta
agaaaagacttggagaatgttgccaaaatcctaaatgtacaagggtattgtagaatcgat
gcttttgtgagaatttggaaagaggagaagagagtagaaacaattattattgaagtcaac
tcacttccgggaatgactcctgctacttgtattttccatcaagcagcaattaacggttac
aaaccttacgactttattgataatattctagaatacggaagacaaagaactgaagctaag
cttagcagatag
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