Flammeovirga sp. MY04: MY04_2429
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Entry
MY04_2429 CDS
T04442
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
flm
Flammeovirga sp. MY04
Pathway
flm00550
Peptidoglycan biosynthesis
flm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MY04_2429 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
flm01003
]
MY04_2429 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
flm01011
]
MY04_2429 (pbpC)
Enzymes [BR:
flm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
MY04_2429 (pbpC)
Glycosyltransferases [BR:
flm01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
MY04_2429 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
flm01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
MY04_2429 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
BiPBP_C
Motif
Other DBs
NCBI-ProteinID:
ANQ49801
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Position
1:3014721..3016967
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AA seq
748 aa
AA seq
DB search
MSWGIIHFLFPYPEKVKYGKVILSKNNEVIGATLNTSDKWCLYSSLEDVDPFFIKAITQK
EDKWFYYHFGINPISVFRAVFYNLTSQKRVSGASTITMQVVRLLEPKERTYLNKLKEVFR
AYQLECTYSKDEILEMYINSIPFGGNIEGIKAATVLYLQKNPNALSTAESSMLSIIPNRP
TSLSIQHQKEFLKSERDKWIVRYYEEGIISDDEKYSALLEPLHIKRENMPRTTPHLNRRL
INKYPLDKVIKTNIDVGKQIKAEKIISKYSRRQSGLGIYNAAALIIDNKTNNVIAYIGSQ
DYDDDQNAGQIDGNLALRSPGSTLKPLIYALGFDRGILTPKLQILDVRHDFGSYSPVNYD
EQFRGEVTVTEALKQSLNIPAVSILEKIGTPALINSLKNAGFNTIKRQEKRLGLSLALGG
CGVNLTELTGLYAAFAQEGSYTPLHFTSAEIDSSKHQIVTPESAYMIYEILSQLKRPDFP
NNYQNSFHAPPIAWKTGTSYGRRDAWSVGYNKEYTVGVWCGNFNNIGVPGLTGAETATPL
LFSLFQSLYTGNNISKWEYDIPEHIFEREVCATSGKVPNIFCDHLVSDTFIPGVSHTEKC
THLKNYFVSTDSSFYYCHDCLPKEGGYIKKQYANPSVELMTFYLENNLPFNAPPQHNPKC
RTSITGVAPQIISPVEGREYIITDKSTELEMKAHLSPDVAYTYWYVNDHFIKKIERGQSL
FHQFKFGQNKISCTDDKGRNAEIYIFVK
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagttggggtattattcattttttattcccctaccctgaaaaggtcaaatatggtaaa
gttatattatccaaaaacaatgaggtgataggtgctacgttaaatacttcagataaatgg
tgtttatatagttctctggaagatgttgatcctttttttattaaagctataactcagaaa
gaagacaaatggttttattaccattttggtattaatcctatttcagtatttagagctgtt
ttctacaatttaacttcacaaaaacgagtttcaggagcatctacgattacaatgcaagtc
gtccgtttattagaacctaaagaaaggacgtacctcaataaactaaaagaggtatttaga
gcttatcaattagaatgtacatatagtaaagatgaaatccttgaaatgtatattaacagt
attccctttggaggaaatattgagggtataaaagcagcaactgtactttatctccaaaaa
aatccaaatgctttaagtacagcagagtcttcaatgttatcaatcatacctaatcgacct
acctcattaagtattcagcatcaaaaagagtttttgaagagcgaaagagataaatggatt
gtaaggtattatgaggaagggataatctctgatgatgaaaaatattctgctcttctagaa
cctcttcatattaagagagaaaatatgccgagaactactccacatctaaatagaaggtta
attaataagtaccctctagataaagtgataaaaacaaacatagatgtgggcaaacagatt
aaagctgaaaaaattatatctaaatattctagaagacaaagtggcttaggtatttacaat
gctgcagctttaattatagataataaaacaaataatgttattgcttacatcggttctcaa
gactacgatgatgatcaaaatgcggggcaaattgatggaaatttagcattaaggtcacct
ggatcaacattaaaaccacttatctatgccctagggtttgatagaggtatacttactccc
aagcttcaaattttagatgtccgacacgattttggttcttacagtcctgtgaattatgat
gaacaatttcgtggagaagttacagttacagaagcgttaaagcaatcacttaatattcct
gcagtctctattttagagaaaatcggtacgccggcactaatcaatagtttaaaaaatgct
ggttttaataccattaaaagacaagaaaaacgtttaggtttatcacttgctttgggtgga
tgtggagtaaatttaaccgaactaacaggattgtacgctgcatttgctcaagaagggtct
tacactcctttacattttacttcagctgaaattgattcttccaagcatcaaatagtcacc
cctgaaagtgcttatatgatctatgaaatattgagtcagttaaaacgacctgatttcccg
aataattatcaaaatagctttcatgcccctcctatcgcatggaagacaggaacatcctat
ggtcgaagagacgcatggagtgtagggtacaataaagaatatacagttggagtatggtgt
ggtaattttaataatattggtgttcccggattaacgggagcagaaacggcgactccttta
ctgttctcattattccaatcactttacacgggaaataatatttcgaaatgggaatacgat
atacccgaacacatttttgaaagagaggtttgtgctacatcgggaaaagtaccaaatatc
ttttgtgaccatttagtaagcgatacttttattccaggtgtttctcatactgaaaagtgt
actcacctaaaaaattatttcgtatcaacagattctagcttttattattgtcatgactgt
cttccaaaagaaggtggctatatcaaaaaacaatatgctaatccatccgttgaattgatg
acattttatttagaaaacaatctaccatttaatgctccacctcagcacaatcctaaatgc
aggacatcaattactggggttgctcctcaaattatttctcctgtagaaggtagagaatat
attattactgataaaagtacagagctagaaatgaaagctcatttaagtccggatgtcgct
tacacctattggtatgtaaacgatcattttattaaaaaaatagagagaggacagtcactt
ttccatcagtttaaattcggacaaaataaaatatcatgtacagatgataagggaagaaac
gctgagatttatatatttgttaaatag
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