Flammeovirga sp. MY04: MY04_2549
Help
Entry
MY04_2549 CDS
T04442
Name
(GenBank) alginate lyase family protein
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
flm
Flammeovirga sp. MY04
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
MY04_2549
Enzymes [BR:
flm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
MY04_2549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hepar_II_III_C
Alginate_lyase
Motif
Other DBs
NCBI-ProteinID:
ANQ49918
LinkDB
All DBs
Position
1:3173834..3176065
Genome browser
AA seq
743 aa
AA seq
DB search
MKNNLYTAVLLILLSVSNVFSQNGNLITSEAQLQEMKLALKSDNLFHSAVNDAIEEVAPY
LKSGLDVPVPKDLAGGYTHSQHKLNYTIMQKAGMLYQLTGNEQYAELIKNTLLKYAELFP
TFDRHPATRSYSPGKFFWQCLNDANWLVYTSQAYSSIYEWLDAGTRDKLNKELFRPYADF
LSVQTPQFFNRLHNHSTWANAAVGMIGLVIHDEDLIQKSLYGLPFENLYAKDNDGGDIIR
ADQKKAGFLANIDHAFSPDGYYFEGPYYQRYAMYPFLMYAVALDRNKKELDIFNYDNKIL
LKGIETLVQLSNEKGEFFPLNDAQKGMSYYSRELKLAISIAYEHGDVHRNGLLSIVKELN
AVPLNYGGFLESNAIAQGKATTYQKRSLLVTDGNKGDKGAIGILRGSRQEYIMKFTQHGM
GHGHFDRLSYLMYNKGDEVLQDYGAARYVNINQKDGGGYLKENKTWAKQTVAHNTLVIGD
RTQCNAKVEKAESATPELYYFNAEDENVQIMSAKDSIAYDGVHQQRTLVLIKDNAFENPL
LLDLFRADLPSDQKLRMPYNYKGQMMYSTFDNQPLNSLPVMGKKDGFQYLWKVGEAPSKG
DFNQVNWFNNKVFYTLNMATSAEDSINFVLLGANDPKMNLRNDKAFHWLKTGKKGSNLYA
SVLETHGGYSYITELAPHTYSSIKNVNVVYNTNAYSAVTFENKEGKKWRFIMCNNDSSSS
SKHKLKIGETTLKWKGVYLLEEI
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataacttatacacagcagtcttgctaattctgttaagtgtatctaacgttttc
agtcagaacggaaatttaattacttccgaggctcagcttcaggaaatgaaattggcttta
aaaagtgataacctttttcactcagcggtaaatgatgcgattgaagaagtggctccctat
ttaaaatctggacttgatgttcctgttcctaaagatttagctggagggtacactcactct
caacataaattaaattatacgattatgcagaaagcgggcatgctttaccaattgacaggt
aatgagcaatacgctgagctaatcaaaaacactttattaaaatacgctgaattatttcct
actttcgatcgtcaccctgccactagatcgtattcaccaggtaaatttttctggcagtgt
ttaaacgatgccaattggttggtttatacaagtcaggcgtacagttcgatttacgaatgg
ttggatgctggtactagagataaattaaacaaggaattatttagaccttatgctgatttc
ttatctgtacaaacgcctcaattctttaaccgtctgcataaccatagtacttgggcaaat
gcagcagtaggtatgattggtttggtcatacacgatgaagatttaattcagaaatcttta
tacggtcttccttttgaaaacctatacgcaaaagacaacgatggaggagatattattaga
gctgatcagaaaaaagcgggcttccttgccaacatcgatcatgctttttctcctgatgga
tattatttcgaaggtccctactaccaaagatatgcgatgtatcctttcttgatgtatgcg
gtagcattggatagaaataaaaaggaacttgatattttcaactacgacaataagatcctt
ctaaaaggtatcgaaacgcttgttcagttatcgaatgagaaaggggaattcttcccatta
aacgatgcacaaaaaggaatgtcttactattcaagagaattgaaactagccatttctatc
gcttacgaacacggtgatgtacatagaaatggtcttttatcgattgtaaaagaattgaac
gcagttcctctaaactatggtggtttcttagaatcaaatgctattgcacagggtaaagca
acgacttaccaaaaaagaagtttgttggtcactgatggtaataaaggtgataaaggagcg
ataggcattttaagaggaagccgtcaggagtacatcatgaagtttacccaacacggtatg
ggacatggtcatttcgaccgcctttcttatttgatgtacaataaaggagatgaggtgtta
caagattatggtgctgctcgttatgtcaacatcaaccaaaaagatggtggcggatactta
aaagaaaataaaacatgggcgaaacaaactgtagctcataacaccttagtgattggcgat
cgtacgcaatgcaatgccaaggttgaaaaagcggaatcggctactcctgaattgtattac
ttcaatgctgaggatgaaaatgtccagatcatgagtgctaaagacagtattgcttatgat
ggcgttcatcaacaaagaactttagtattaattaaagacaatgcatttgaaaatccttta
ttacttgatttattccgagcagaccttccttctgatcagaaattaagaatgccttataat
tataaaggtcagatgatgtattctactttcgataatcaaccattaaattctttaccggtg
atgggtaaaaaagatggtttccaatatttatggaaagtaggtgaagcgccatccaaaggg
gattttaatcaggtcaactggtttaacaataaagtgttctatacactcaatatggccact
tctgcagaggacagcatcaattttgttcttcttggcgccaacgatcctaaaatgaacctt
agaaacgacaaggctttccactggttaaaaacaggtaaaaaaggaagtaatttatatgca
tccgtattagaaactcacggaggttattcttacatcacggagttggctcctcacacgtac
agtagtattaaaaatgtaaatgtagtgtacaataccaatgcgtattctgctgtgactttc
gaaaataaagaaggcaagaaatggagatttataatgtgcaataatgatagctcctcttca
tcaaaacataaattgaaaataggtgagactaccttaaaatggaaaggggtttacctattg
gaagaaatttaa
DBGET
integrated database retrieval system
