Flammeovirga sp. MY04: MY04_2694
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Entry
MY04_2694 CDS
T04442
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
flm
Flammeovirga sp. MY04
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
flm01011
]
MY04_2694
Enzymes [BR:
flm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
MY04_2694
Peptidoglycan biosynthesis and degradation proteins [BR:
flm01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
MY04_2694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM1_NFP_LYK
LysM_RLK
HRDC
Motif
Other DBs
NCBI-ProteinID:
ANQ50063
LinkDB
All DBs
Position
1:complement(3376475..3378643)
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AA seq
722 aa
AA seq
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MQFNKLFAPFIFVCVIVSTSSLFAQDEGDMMTWKDSIYTVALPEGYLLPSDTLEIVEAAP
YAPWFENFEDFDTTSAILLDVVDQTYDYVPNVTDSLVKERLKELENVIPLEYHERVRLFI
DYFAVRNRDYTLGIMERQNIYFPMFERILAEEGVPTELKYLAVIESALKPVALSRVGAKG
LWQFMPRTGRAYGLKQSYQIDDRMDPEKATRAAARYLKFLYNYHGDWELAIAAYNCGPGN
IRKAQRRSGKKKFWDIYKKLPRETRSYLPQYVAMAYVLTYADEYNLVQDLPKYEIPSEDI
FVSQSVDLGLLADELSVCREDLTLLNPSLRFGFAPNYVKNFRIKIPEARFNYYLENQDEI
LSKIKYTGNGANVGDGYYYHYVRSGESLGLIARKNRVSISSLKAWNNLRSNTIYPGQKLK
IYGNAYSPGPSTVSSSSSSKSKSTKSTSSSSSKTSGASIYHTVRSGETLGMIAKKYRVYV
ADIKRLNKIKGTTIYKGQRLLIKEGKYKAPEAQTTSTASKSTPAASNNSKDNLVYHTVRS
GETLGGIAEQYNTSASNLRRWNGISGSTIYKGQKIKVYTSNKVTSSSASKSTKTTSNTSN
TTTTAYGPSSKTRYHKVKSGDNLVEIAKMYRVYVNDIKKVNNMKTSTIQAGQTLTIPPSP
SSVLNEQKKSSKSNTTSYYTVKSGDTLWSISQKLGLSVGELKQLNGLKSNNLKVGQRLKT
KS
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcaataagttattcgccccttttattttcgtatgtgtgatagtatctacgtct
tctttatttgcccaagatgagggtgatatgatgacatggaaggatagtatttataccgtt
gctttacctgaaggttatcttttaccatctgatactttagagattgtagaagcggcccct
tatgctccttggtttgagaattttgaagattttgataccacatcagcaattcttttggat
gtggtcgatcagacatatgattatgtaccaaacgtaacggatagtttagtaaaggaacgt
ctgaaggaattggaaaatgtgattccattagagtatcacgaaagagtacgtttgtttatc
gactattttgcggtacgtaatagagactacactttgggaattatggagcgtcagaacatt
tatttcccaatgttcgaacgaattttagcggaagaaggagtacctacagaattaaaatat
ttagcagttattgagtcggctttaaagcccgtagcactttctagagtgggagcaaaaggt
ctttggcaatttatgccaagaacgggtagagcctatggtctaaaacaaagttatcagatt
gatgacagaatggatcctgaaaaagcgacaagagcagcggcacgttaccttaagttctta
tataattatcatggagattgggagttggcaatcgctgcatacaattgtggtccgggtaat
attagaaaagcacaaagaaggtctggaaagaaaaaattctgggatatttataagaagctt
ccaagagagacaagatcgtatttacctcaatatgtagcaatggcttatgtattgacgtat
gctgatgaatataacttggtacaggatttaccaaaatatgaaattccgtcagaagatatt
ttcgtgagtcagtcagttgatctaggcttactagctgatgaattatcggtttgtcgagaa
gacctaacacttttgaacccttctttaagattcggttttgctcccaactatgtgaagaac
tttagaattaagattcctgaggcacgttttaattattacttggagaatcaggatgaaatt
ctttcaaaaattaaatatactggtaatggagctaatgttggagatggctattattatcat
tatgtaagaagtggagagtcgttagggttaattgctagaaagaatcgtgtatcaattagt
agtttgaaagcatggaataaccttagaagtaataccatttatcctggtcagaaattaaag
atttacggtaatgcgtatagtccaggaccgtcgaccgtttcttcatcaagctcatcaaaa
tcgaaaagtacgaagtcaacttcaagttcatcttctaaaacaagtggtgcaagtatttac
catacggtaagaagtggagagactttgggaatgattgccaaaaaatatagagtgtatgtt
gcggatatcaagagattgaacaagataaaaggaacaacgatttataaaggtcagcgtctt
ttgatcaaggaaggaaaatataaggctccggaagctcagacaacaagtacagcatcaaaa
tctactccagctgcatcgaataattctaaagataatttagtgtatcataccgttagaagt
ggtgaaacgcttggtggaattgctgaacaatacaatacatcagcttctaatttgagaaga
tggaatggaataagtggttcgacgatttataaaggacaaaaaataaaggtttatacttct
aataaagtaacttcttcaagtgcttcgaaaagtactaagacaacatcaaatacatcgaat
accacaactaccgcttatggtccttcatcaaaaacgaggtatcataaagtgaagtcgggt
gataacttggtggagattgccaagatgtatagagtgtatgtaaacgatatcaagaaggtg
aataatatgaaaacttctactattcaggcaggacagacattaacgattcctccatcgccg
agtagtgtgcttaatgagcagaagaaatcatcaaaaagtaatacaacttcttattatact
gtgaagagtggagatactttatggagtatttctcagaagttaggtctttctgttggagag
ttaaagcaactaaatggcctaaaaagtaacaatttgaaggtcggacaacgattaaagaca
aaatcttaa
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