Flammeovirga sp. MY04: MY04_2837
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Entry
MY04_2837 CDS
T04442
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
flm
Flammeovirga sp. MY04
Pathway
flm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MY04_2837 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flm03400
]
MY04_2837 (uvrA)
DNA repair and recombination proteins [BR:
flm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MY04_2837 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MY04_2837 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
DnaJ_CXXCXGXG
AAA_23
RsgA_GTPase
nSTAND3
AAA_21
ATPase
Viral_helicase1
AAA_22
PRK
Motif
Other DBs
NCBI-ProteinID:
ANQ50205
LinkDB
All DBs
Position
1:3561871..3564744
Genome browser
AA seq
957 aa
AA seq
DB search
MIISITLKQQSEAYVEEEIAIYGARENNLKNFDLTFPRNKLVVITGVSGSGKSSLAFDTI
YAEGQRRYMESFSAYARSFIGNMERPDVDKIEGLSPVISIEQKTTSRNPRSTVGTTTEIY
DFLRLLYARTGEAFSYVTGEKMIKQSEDQIIEFLMSHFDEQKMVILAPVIKGRKGHYREL
FVQLRKQGYSKVRIDGEIQDLVPKMQVDRYKTHDIEVVIDRVKVVEKDRFRIAQSIKTAM
KEGKGIIVCFFPDAPKKEQVKYFSKFLMDPKSGISYDEPAPNMFSFNSPYGACPTCNGLG
EIEEITKEAVIPDDSKSIFSGGIVPLGEYRDIYIFKMIEQHLKQRGFSLTTPINELSDEA
IEVVLYGSDEEIEVLSAKDSKYDKAWITQFEGVIPFLKRHANSSSDKVKNWAEEFTIIKK
CPTCNGQRLKKESLHFKIAGKNIAELAEMDIKAFGDWINNVDPDLTERQKTIGAEVLKEL
RKRTGFLIDVGLDYLTLNRSLKTLSGGEAQRIRLATQIGTQLVGVLYILDEPSIGLHQRD
NVKLIKALQDLRDLGNSVIVVEHDKDMMLASDYILDIGPKAGLHGGNVVAAGEPSSFLKQ
HTTTADYLSEKLAIEVPKQRRKGSGNVISLKGANGNNLRNVSVDFPLGKMICVTGVSGSG
KSTLIHDTLYPILNQKIYKSKKNPKEYESVEGLNFIDKVIEVDQSPIGRTPRSNPATYTD
MFSEIRSLFTNLPESKIRGYKPGRFSFNVKGGRCETCQGAGKKLIEMDFLPDVYVDCEDC
KGKRYNRETLEIRYKGKSISDVLNMTVNQAVEFFEAYPKILRKLTALKEVGLGYITLGQH
ATTLSGGEAQRVKLATELSKKDTGRTFYILDEPTTGLHFEDIQHLLNVLQQLVEKGNTVL
VIEHNLDVIKVSDYIIDLGPEGGKGGGQIIAKGTPEQVAKSKKSYTAKFLRDELKNS
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atcatcatttctatcacattgaagcagcaatcagaagcctacgttgaagaggaaatcgcc
atttatggtgcgagagaaaataacctaaagaattttgaccttacatttccaagaaataag
ctcgtagttattactggggtttctggaagtgggaaatcatccttagcattcgatacaatt
tatgctgaaggtcaaagacgttatatggaaagtttctctgcctatgcccgttcctttatt
gggaatatggagcgtcctgatgtcgataaaatcgagggattgagtcctgtgatttcaatt
gaacaaaagactacatcaagaaatccgcgttcgacggtgggtactactacagagatttat
gattttctccgtctactttatgctagaacaggtgaagcattctcttatgtgacaggtgaa
aaaatgatcaagcagtcagaagatcaaattattgagtttctgatgagtcattttgatgaa
caaaaaatggtgatacttgcccctgttattaaaggtagaaaaggtcattatagagaactt
tttgttcagcttcgtaagcaaggctacagcaaagtgagaatcgatggtgagatacaagat
cttgtaccaaaaatgcaggtcgatcgatacaaaactcacgatattgaggtggttatcgat
cgggtaaaagtagtagaaaaagatcgtttccgcattgctcaatctataaaaacagcaatg
aaggaaggaaagggaattattgtatgcttcttccctgatgctcctaaaaaagaacaagtg
aagtatttctctaagttcttgatggacccaaaatcaggaatttcctacgatgaacctgct
cctaacatgttctccttcaactctccttacggtgcctgtccaacgtgtaatggcttggga
gaaattgaggaaattacgaaagaagcagtcattcctgatgatagtaaaagtattttcagt
ggcggaatcgttcctcttggtgaatatcgtgatatctatatttttaagatgatcgaacaa
caccttaagcaaagaggcttttcgttaactactccaataaatgagctaagtgatgaagcc
attgaggtagtgctttacggttcggatgaagaaattgaggtactcagtgccaaagattcc
aaatacgataaagcatggattactcagtttgaaggggtcatcccatttttaaaacgccac
gccaatagtagttctgataaagtgaaaaactgggcggaggaatttacgatcatcaaaaaa
tgtcccacttgcaatggacaacgattaaagaaagaatcactgcattttaaaattgcaggt
aaaaatattgctgagttagcagaaatggatatcaaggcttttggtgattggatcaataat
gtggatcctgatttaactgaaaggcaaaagaccattggtgcagaagttttaaaagaactt
cgcaaacgtaccggctttttgatagacgttggtctagattacctcacgttaaatagatct
ttaaaaacactttctggaggtgaagctcaacgtattcgtttggccactcagattggtact
cagcttgtcggcgtattgtatattttagatgagccaagtatcggtttacatcaaagagac
aatgtgaagctaattaaagccttacaagatcttagagatttaggtaactccgtaattgtg
gtagaacacgataaagacatgatgcttgcctcagattatattttggatattggtccaaaa
gcaggcttacatggcggtaatgtcgttgctgctggagaaccatcatcattcctaaaacaa
catactaccactgccgactacctaagcgagaaattggctattgaagttcctaagcaaaga
agaaaaggaagtggtaatgtgatctccctcaaaggagcgaatggtaacaacctaagaaac
gtttctgtcgattttcctttgggtaaaatgatttgtgtaacgggtgtatctggatcgggt
aaatctacactcattcacgatacattatatccgattctaaatcagaaaatctataagtcg
aagaagaatcctaaagaatacgagtcggtagaaggactaaactttatcgataaagtcatt
gaggtagatcaatcacctatcggtagaacacctcgttctaaccctgccacttataccgac
atgttctctgaaattagatctttgtttacgaatctacccgaatcgaagattagaggatat
aaacccggccgattctcttttaatgtaaaaggaggtcgttgtgaaacttgtcaaggtgca
ggtaaaaagttaatcgagatggatttccttccggatgtctatgtagattgtgaagactgt
aagggcaaacgttacaacagagaaacactagagatccgttataaaggaaaatcaatttcc
gatgttctaaacatgactgtgaatcaagcagtagaattctttgaggcctatcctaaaatt
cttagaaagttgacggcattaaaagaagtgggattaggatatatcactttaggtcaacat
gccactacactatcaggaggtgaagcacaaagagtgaaactagcgacagaattatcgaag
aaagatactggtagaacattctacattcttgatgaacctacaacaggtcttcacttcgaa
gatatccaacatctattgaatgtattacagcaattggtagaaaaaggaaatacggtattg
gtcatcgaacataacctagatgtgatcaaagtatcggattatatcatcgaccttggtcca
gaaggtggtaaaggtggtggacaaatcattgcgaaaggcactcctgaacaagttgcaaaa
agtaagaaaagctacactgccaaatttcttagagatgaattgaaaaattcttaa
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