Flammeovirga sp. MY04: MY04_2977
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Entry
MY04_2977 CDS
T04442
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
flm
Flammeovirga sp. MY04
Pathway
flm00550
Peptidoglycan biosynthesis
flm01100
Metabolic pathways
flm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MY04_2977 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MY04_2977 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
flm01011
]
MY04_2977 (mrdA)
Enzymes [BR:
flm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MY04_2977 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
flm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
MY04_2977 (mrdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ANQ50345
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All DBs
Position
1:complement(3738014..3739960)
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AA seq
648 aa
AA seq
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METRRWHLIFGFTMLFILYGIVLLNIQVLSSEYKTMSEANIVDRQVEYPLRGMIYDRNGQ
LLASNAAVFDIMVTPKYFKLAEEDSAILAGMLDYTIEELRFNIKKARGYSWFKPSVLKKQ
ISQIDYARIQDKIIRFKGISIQARTIRSYPHKSLANALGYVKEVSRSYLEKDTTKYYQSG
DLIGISGIEKFYEKQLRGQRGVSYVMKNVKGVVKGPYADGKLDTIPRVGATLTSSIDLDL
QKYGEDLMVNKKGAIVAIDPSTGEILAMISAPSYDPNELTGEGKRVSKNYSSLSRDKNKP
LFNRSMQSRYPPGSTFKTVMAMIGLQRGVVDTTTTYFSCNKRLVGCHDHASPLNVRGSIV
NSCNPWYYQEIRRLMDDEGKRYQTSDRLRETLDEWRDEVKGYGLGVKLGVDMPYEKGGLV
PSSKLYDRIYKGGGWKISTIHSISIGQGEVLSMPIQLANLGAIIANRGHYYTPHIIKDVG
GEGPLEQYKEKHTVNVKPEYVDHIARAMADVPRIGTARRAFSNDIVICGKTGTAQNPHGE
DHSIFMGFAPLHNPKIAIAVYVENAGFGGTWAAPIASLMMEKYVNGEVKRGYLEKYVYSG
DLIAKEEARKERERKLKELREKNKARYKEIQARKAKQDSVKVTTSDSE
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggagacaagacgctggcatcttatttttggttttaccatgctattcatcttatatggt
attgtactacttaatattcaggtattaagtagtgagtataaaaccatgtctgaagcgaac
atcgtagaccgtcaagtagaataccctcttcgtggtatgatttacgataggaatggtcaa
cttttagcgtcgaatgctgccgtttttgatattatggttacgccaaaatattttaaactg
gccgaagaagattcagcaatacttgcaggtatgttggattataccattgaagaattgcga
ttcaacatcaaaaaagctagaggatattcttggtttaaaccttctgttttaaagaagcag
atcagtcaaatagattacgctaggatccaagataaaatcatccgttttaaaggaatttcc
attcaagcaagaacgattcgttcctatcctcataaaagtttagccaatgctttaggctat
gtaaaagaagtatcaagatcctatttagaaaaagataccactaagtattatcaaagtggt
gaccttataggcatatctggtatagagaaattttacgaaaagcaattaagagggcaacgt
ggagtaagctacgtgatgaaaaacgtaaaaggggtagtaaaaggtccatatgctgatggt
aaattagatactattccaagagtaggtgcgacattaacttcatccatagatcttgattta
cagaaatatggagaggatttgatggtgaacaaaaaaggagcaattgtagctatagatcct
agcacaggagagattttagccatgatctcagcaccttcttatgatccaaatgaattaaca
ggagagggtaaacgagtttctaaaaactacagcagcctttcaagagataaaaacaagcct
ttatttaatagatccatgcaatcaaggtatcctcctggatctacctttaagacggtaatg
gccatgattggccttcagagaggagtagtagataccaccactacatatttttcttgtaac
aaacgattagtagggtgtcacgaccatgcaagtccattaaatgttcgcggatcaattgtc
aactcatgtaacccatggtattatcaagaaatccgaaggttaatggatgatgaagggaaa
agataccagacatctgaccgtttaagagagactttggatgaatggagagacgaagtaaaa
ggctacggtctaggtgtcaaattaggcgttgacatgccttatgaaaaaggtggtctagtg
ccaagttcaaaactttacgatagaatttacaaaggtggaggatggaaaatcagtacgatt
cattccatcagtattggtcagggggaagtattatcaatgccaattcagttggccaactta
ggtgcaattatagcgaatagaggacattattatactccacatattattaaagatgttgga
ggtgaaggtccattggaacaatataaggagaaacatacggtaaatgttaaaccagaatat
gtagatcatattgctagagctatggcggatgtgcctagaataggtacagcaagaagagca
tttagtaacgatattgtgatctgtggtaaaacaggtacagcacaaaaccctcacggagaa
gaccattcaatttttatgggatttgctccgttacacaatcctaaaatcgccattgcagtg
tatgtagagaatgctggttttggtggtacatgggctgctccaatcgcctctctaatgatg
gaaaagtacgtgaacggagaagtgaaacgtggctacctagagaaatacgtttatagcgga
gatttaattgctaaagaagaagcaagaaaagaacgtgagcgtaaactcaaagaattaaga
gagaaaaataaagcgagatataaagagattcaggcgcgtaaggcgaaacaggattctgtg
aaggtgacgacttctgactcggaatag
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