Flammeovirga sp. MY04: MY04_3310
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Entry
MY04_3310 CDS
T04442
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
flm
Flammeovirga sp. MY04
Pathway
flm00061
Fatty acid biosynthesis
flm00071
Fatty acid degradation
flm01100
Metabolic pathways
flm01212
Fatty acid metabolism
flm02024
Quorum sensing
flm04146
Peroxisome
Module
flm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MY04_3310
00071 Fatty acid degradation
MY04_3310
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MY04_3310
09145 Cellular community - prokaryotes
02024 Quorum sensing
MY04_3310
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
flm01004
]
MY04_3310
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
flm04147
]
MY04_3310
Enzymes [BR:
flm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MY04_3310
Lipid biosynthesis proteins [BR:
flm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MY04_3310
Exosome [BR:
flm04147
]
Exosomal proteins
Exosomal proteins of breast milk
MY04_3310
Exosomal proteins of breast cancer cells
MY04_3310
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Trans_coact
Motif
Other DBs
NCBI-ProteinID:
ANQ50672
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All DBs
Position
1:complement(4160951..4162711)
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AA seq
586 aa
AA seq
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MELKRVFDFIDQQKSLYGGLEVCFANKVNEEWVTYSTEKTSNILYQLGSGLLRYGLKKGD
KVAIVSENRPEWNFVDLACAQIGVTVVPIYPTITEDDYLYIFNHAEIKVAFLESQHLVNK
IRKIDEKLPELEKVYTFNEVEGETSWKTLLSASEEEIANIDKIKDSIQEEDLYTIVYTSG
TTGNPKGVMLSHRNVVTDAIAAAETLPVDRGNARALSFLPLSHVYERTSLYSYLCGGVSV
YFAENVAKVADNLKEVKPHVFCTVPRLLEKVYDAILNKGMATKGLARAIFFWSLNLGLRY
NPREKQSLWYRFQHFIADKLVFKKWRAALGGEIRNMNVGAAALQPRLIRSFWAAGIKVCE
GYGMSEAAPVVCVNRVNPQDMMIGTVGPVLNGIDVKIAPDGEILIKGPNVMMGYYKQPEL
TAETVVDGWLHSGDIGELIDGKFLKITDRKKELFKTSAGKYISPQFLENKLKESFYIEQV
AVIGSNQKFAAALIVPNFEALSNWCEENNIFEENPQKVIENPTVLKMFKKEIAAANKSFA
RYEQVQKFSLLENEWTVDTGEVTPTLKPKRKIINEKYEKEIEEIYS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggaactaaaacgagtatttgattttattgaccagcaaaaatcgctatacggtggttta
gaggtgtgttttgcaaataaagtaaacgaagaatgggttacttactctactgaaaagaca
tctaatattctatatcaattaggtagtggcttattacgttacggcctaaagaaaggcgat
aaagtagcaattgtttcggaaaaccgtcctgaatggaattttgtagatttggcctgtgct
caaattggagtaacagtagtgcctatttaccccaccattacagaggacgattatttatat
attttcaatcatgctgaaatcaaggtagcatttttagaatcgcaacaccttgtaaacaaa
atcagaaagattgatgaaaagctacctgaactagagaaggtctatacctttaatgaagta
gaaggagaaacctcatggaagactttactttctgcatcggaagaagaaatagctaacatt
gataagatcaaagacagcattcaagaagaagatctttacactattgtctatacctctggt
acgacaggcaatcctaaaggagtgatgctttctcatagaaatgtggttacagatgctatt
gctgccgcagaaacccttcctgtagatagagggaatgcaagagcattaagtttcttaccc
ttatctcacgtatatgaacgtacaagtttgtactcttatttatgtggtggcgtatcggtt
tattttgctgaaaatgtagcaaaagtagccgacaacttgaaagaggtaaaacctcatgtt
ttctgtacggttcctcgtcttttagaaaaagtatacgatgctattcttaataaaggaatg
gccacaaaaggtttagcaagggctattttcttttggtcattaaacttgggactgcgttat
aatccaagagagaaacaatcgctttggtaccgtttccaacactttattgctgataaattg
gtcttcaagaaatggagagcagctttaggtggtgaaattagaaatatgaacgtaggtgct
gcagcacttcaaccacgattgattcgttctttctgggctgcaggtattaaagtatgcgaa
ggttacggtatgtctgaagccgctcctgtagtttgtgtgaacagagtaaatccgcaagac
atgatgattggcacagtcggtcctgttctaaatggaattgatgttaaaattgcacctgac
ggagagatcttgattaaaggtccaaacgtgatgatgggctactacaaacaacccgaattg
acggccgagacggttgtagatggttggttacactctggagatattggcgaattaatcgat
ggaaaattcttaaagatcaccgatcgtaagaaagaattattcaagacttcggcaggtaaa
tacatttctcctcagttcttagaaaataagctgaaagaatcgttttatatagaacaagta
gctgtaattggcagtaaccaaaagtttgcagccgctttaatcgttccaaatttcgaagca
ttatcaaattggtgtgaggagaacaatatttttgaggaaaaccctcaaaaagtgattgaa
aaccctactgtcttgaaaatgttcaaaaaggaaatagctgcggccaacaaatcatttgct
cgttatgaacaagtacaaaagttcagtttactagaaaatgaatggacggttgatacaggt
gaagtaacaccaacgctgaaacctaagcgaaaaatcatcaacgaaaaatatgaaaaagag
attgaggagatttactcttaa
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