Flammeovirga sp. MY04: MY04_3395
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Entry
MY04_3395 CDS
T04442
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
flm
Flammeovirga sp. MY04
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flm03032
]
MY04_3395
03036 Chromosome and associated proteins [BR:
flm03036
]
MY04_3395
03400 DNA repair and recombination proteins [BR:
flm03400
]
MY04_3395
DNA replication proteins [BR:
flm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MY04_3395
Chromosome and associated proteins [BR:
flm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MY04_3395
DNA repair and recombination proteins [BR:
flm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MY04_3395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_1
HU-HIG
FliG_N
HU-CCDC81_euk_2
SDH_protease
Aquarius_N_1st
Motif
Other DBs
NCBI-ProteinID:
ANQ50754
LinkDB
All DBs
Position
1:4300541..4300873
Genome browser
AA seq
110 aa
AA seq
DB search
MTEILRKIEKRQEAQTSNAATMVEVDKEIVGQVLEDFFNVVKDKMAEGNNIYIRRFGSFV
NKKRASKKGRDISRGEIIPIPEHFIPSFKPSKEFVEKIKGSDKVRLINEN
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atcacagaaattctcagaaaaattgagaagcgtcaagaagcacagacttcaaatgcagcg
acaatggtagaagtagataaggaaattgtaggtcaagttcttgaagacttctttaatgtt
gtgaaggataaaatggctgaaggtaacaatatctacatccgtcgttttggtagctttgtt
aataagaagcgtgcttctaaaaaaggtagagatatctcaagaggagagatcattcctatt
cctgagcacttcattccaagcttcaaaccttctaaagagtttgttgaaaaaatcaaagga
agtgacaaagttcgtttgatcaacgaaaactaa
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