Flammeovirga sp. MY04: MY04_3431
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Entry
MY04_3431 CDS
T04442
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
flm
Flammeovirga sp. MY04
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flm03032
]
MY04_3431 (gyrA)
03400 DNA repair and recombination proteins [BR:
flm03400
]
MY04_3431 (gyrA)
Enzymes [BR:
flm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MY04_3431 (gyrA)
DNA replication proteins [BR:
flm03032
]
Prokaryotic type
DNA Topoisomerases
MY04_3431 (gyrA)
DNA repair and recombination proteins [BR:
flm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MY04_3431 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ANQ50785
LinkDB
All DBs
Position
1:complement(4338311..4340881)
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AA seq
856 aa
AA seq
DB search
MADENIISINIEDEMRSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLYGMAELGLSYNRP
YKKSARIVGEVLGKYHPHGDSSVYDTMVRMAQPWSLRYMLVDGQGNFGSIDGDSPAAMRY
TEARMKEIAGEMLSDIKKNTVDFEPNFDDSLKEPSVLPSRIPNLLLNGSSGIAVGMATNM
APHNMNEVCDAIIAYIENPDIEMSELTDIVKGPDFPTGAIIYGYDGVKKALETGRGRVVM
RAVTAFETIGNGREQIVVTEIPYMVNKANMIEKTADLVNDKKIEGISAIRDESDKNGIRI
VYELKKDAVPDVVLNHLFKQTALQSSFSVNNIALVKGRPKTLNLYDLIHHYVEHRHEVII
RRTQFELDEAERRLHILEGYLKALDNLDEVIALIRASKDGEVARAELISKFEFSEIQAKA
ILDMRLQRLTGLEREKIIEEHKEVVALVEDLRDILARRERQMDIIKTDLIEVKEKYGDER
RSRIEYNADDLDIEDLIEDKEMVITISHEGYIKRTPLIDYKSQGRGGVGSRGASSKDDDF
TEHMFVASNHNYLLLFTNLGRVYWQKVFRLPEGSKTAKGRPLQNLLNIREGEKVQAVICT
KNLNDQDYINNHYLMMLTEKGIVKKTVLEAYSRPRRDGINAININEGDKLFNVMLTDGQN
DVVIATRMGMATRFDESNVRSMGRGATGVRGIILKGEEDRVVGMACISKEEIEAQTKSLM
VISENGYGKRTDLEEYPCRTNRGGKGLKAMQVTDKTGKLASLFSVEESDDLIVITKEGIT
IRTAVSNFRIMGRATQGVKAIRLNDSDEISSVEIVPILEEEETEENTTPENSTEEGNTSD
TPTNENDSNEEESSEE
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaaaatatcatctctattaacatagaggatgaaatgagaagtgcctacatt
gattattcaatgtcggtgattgtatctcgtgcacttcctgatgttagagacggtcttaag
cctgtacacaggcgtgtgttgtacggtatggcagaacttggactaagctataacagaccg
tataaaaaatcagccagaatcgttggtgaagttcttggtaagtaccatccacatggtgac
tcatcagtatacgacacgatggttcgtatggctcaaccttggtcattgcgttacatgctt
gtagacggacaaggtaactttggttcaattgatggtgactctccggcagcgatgcgttat
acggaggctcgtatgaaagagatcgcaggtgaaatgctttctgacatcaaaaagaacacg
gtagactttgaacctaactttgacgattcattgaaggaaccatcagtgttaccttctaga
attccaaaccttcttttgaacggttcatcgggtatcgccgtaggtatggctacaaacatg
gctcctcacaacatgaatgaagtgtgtgatgccattatcgcatatattgagaatccagat
atcgaaatgagcgagctgactgacattgtcaaaggcccggatttccctacaggagcaatc
atttatggatatgatggagttaaaaaagcgttagaaactggtagaggtagagtagtaatg
cgtgctgttactgcgttcgaaactattggaaatggacgtgagcaaatcgttgttacagaa
attccttacatggtcaacaaggcaaacatgatcgaaaagactgccgaccttgtaaacgat
aagaaaatcgaaggtatttctgcaatccgagacgaatccgataaaaacggtattcgtatc
gtatacgaactgaaaaaagatgcagtgccagacgttgtattgaaccacttgttcaagcaa
acagcacttcaaagttctttcagtgtaaacaacattgcactagttaaaggtagaccgaag
acgttaaatctttatgatttaatccaccattatgtggagcaccgtcatgaggtaattatc
agaagaactcaattcgaattagacgaagcagaaagaagacttcatattttagaaggttac
ttaaaagctttagataatttagatgaggttattgccttaattagagcatcaaaagatggt
gaagtagcaagagctgaattgatttctaaattcgagtttagtgagattcaagcgaaagct
attttggatatgcgtcttcaaagattgactggtcttgaaagagaaaagatcatcgaagag
cataaagaagttgttgctttagttgaagacttaagagatatcttggctagacgtgagcgt
cagatggatatcattaagacggacttgatcgaagtaaaagagaagtacggtgatgaaaga
agatctcgtattgaatacaatgcagatgatcttgatatcgaagatttaatcgaagacaaa
gaaatggtgattactatttctcacgaaggttatatcaagcgtactccacttattgattat
aaatcacaaggtcgtggtggcgtaggttcaagaggtgcatcgtcgaaagatgacgacttt
acagaacatatgttcgtagctagtaaccacaattacctattgttattcactaacttaggt
agagtatactggcagaaagtgttccgtttacctgaaggttctaagacagctaaaggtaga
ccacttcaaaacctattgaacatccgtgaaggtgaaaaagtacaagctgtaatttgtacg
aagaacctgaacgaccaagattacatcaataatcattacctaatgatgttgacagaaaaa
ggtatcgtgaaaaagacagttcttgaggcatactctagacctcgtcgtgacggtatcaat
gctattaacattaatgaaggtgacaagttattcaacgtaatgttgactgacggtcagaat
gatgttgttatcgctacacgtatgggtatggctactcgtttcgacgaaagcaatgtccgt
tctatgggtagaggtgctactggtgtaagaggtattattcttaaaggagaagaagataga
gtggttggtatggcttgtatttctaaagaagaaattgaagcacaaactaaatctctaatg
gtgatctctgaaaatggttacggtaaacgtaccgatttagaagaatatccttgtagaaca
aatagaggtggtaaaggtctaaaagccatgcaagtaactgataaaactggtaagcttgct
tcattattctctgtagaagagtctgatgatttgatcgttatcactaaagaaggtattact
atccgtactgccgtttctaacttccgtatcatgggtagagctacacaaggtgtaaaagcg
atccgtttgaacgatagtgacgaaatttcatcagtagaaatagtgcctattttagaagaa
gaagagactgaagaaaatacaactccagaaaacagtacggaggaaggaaatacttcagat
actccaacaaatgaaaacgattcgaatgaagaggaatcttcggaagaataa
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