KEGG   Flammeovirga sp. MY04: MY04_3478
Entry
MY04_3478         CDS       T04442                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
flm  Flammeovirga sp. MY04
Pathway
flm00010  Glycolysis / Gluconeogenesis
flm00020  Citrate cycle (TCA cycle)
flm00260  Glycine, serine and threonine metabolism
flm00280  Valine, leucine and isoleucine degradation
flm00310  Lysine degradation
flm00380  Tryptophan metabolism
flm00620  Pyruvate metabolism
flm00630  Glyoxylate and dicarboxylate metabolism
flm00640  Propanoate metabolism
flm00670  One carbon pool by folate
flm00785  Lipoic acid metabolism
flm01100  Metabolic pathways
flm01110  Biosynthesis of secondary metabolites
flm01120  Microbial metabolism in diverse environments
flm01200  Carbon metabolism
flm01210  2-Oxocarboxylic acid metabolism
flm01240  Biosynthesis of cofactors
Module
flm_M00009  Citrate cycle (TCA cycle, Krebs cycle)
flm_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
flm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
flm_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:flm00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    MY04_3478 (lpdA)
   00020 Citrate cycle (TCA cycle)
    MY04_3478 (lpdA)
   00620 Pyruvate metabolism
    MY04_3478 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    MY04_3478 (lpdA)
   00640 Propanoate metabolism
    MY04_3478 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    MY04_3478 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    MY04_3478 (lpdA)
   00310 Lysine degradation
    MY04_3478 (lpdA)
   00380 Tryptophan metabolism
    MY04_3478 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    MY04_3478 (lpdA)
   00670 One carbon pool by folate
    MY04_3478 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:flm04147]
    MY04_3478 (lpdA)
Enzymes [BR:flm01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     MY04_3478 (lpdA)
Exosome [BR:flm04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   MY04_3478 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_2 HI0933_like NAD_binding_8 GIDA Lys_Orn_oxgnase DAO FAD_binding_3 AlaDh_PNT_C 3HCDH_N Thi4 2-Hacid_dh_C DUF5800 Lycopene_cycl Amino_oxidase Trp_halogenase
Other DBs
NCBI-ProteinID: ANQ50831
LinkDB
Position
1:complement(4396592..4397995)
AA seq 467 aa
MSATKFDLIVIGSGPGGYVAAIRASQLGLKVAVVEKAEVGGICLNWGCIPTKALLKSGQV
FQYINHAKDFGINVGEAAADFPAMVQRSRGVAAGMSKGVEFLIKKNKIEKLLGFGKLVGP
KQVEVTDAEGKATVYDAEHIVLATGGRAKELPHIKIDGEKVIGYRQAMTLPEQPKKMVVM
GSGAIGVEFAYFYNSIGTEVTVVEYLPRIVPNEDADVSKELERNFKKQGIKVMTNAAVQT
VDTSGDGCKVVIKDNKKDKETTIECDVVLSAVGVETNLEGIGLEEVGVAHDRGKVLINDY
YQTNIPSVYAIGDIVKGPALAHVASHEGIICVEKIAGLTPEPMNYGNIPGCTYTVPEVAS
VGMTEEMAKEAGYEVKVGKFPFSASGKASAAGHKEGFVKVIFDAKYGEWLGCHMIGSNVT
EMIAEAVVGRKLEVTGHEIITAVHPHPTLSEAVMEAAAQAYDECIHL
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgtcagcaacaaaatttgatttaatcgtaataggatcaggtcctggtggatacgttgcc
gctatccgtgcttctcaattaggtttaaaagtagccgtagtagagaaagcagaagtaggt
ggtatctgcttaaactggggttgtatcccaacgaaagctttactaaaaagtggtcaggtg
ttccaatacatcaaccatgcaaaagactttggtattaatgtaggtgaggcagctgccgat
ttccctgcaatggtacaaagatctcgtggtgtggctgctggcatgagtaaaggtgttgag
ttcttgattaaaaagaataaaatcgagaaacttcttggatttggtaaattagttggtcct
aaacaagtagaagttacagacgcagaaggtaaagctactgtttacgacgcagaacatatt
gttttagctacgggtggtagagcaaaagaacttcctcatatcaaaattgatggagagaaa
gtaattggttaccgtcaagcaatgacacttcctgagcaacctaagaaaatggtggttatg
ggatctggtgcaatcggtgttgagtttgcttacttctataactctatcggtacagaagta
actgttgtagaatacttaccacgtatcgtacctaacgaagacgctgatgtttctaaagaa
ttagagcgtaacttcaaaaaacaaggaattaaagtgatgactaacgctgctgttcaaaca
gtagatacttctggagacggttgtaaagtagtgatcaaagacaacaagaaagataaagaa
acaactatcgagtgtgatgttgttctttctgcagttggtgttgaaactaacttagaaggt
atcggtcttgaggaagtaggtgttgctcacgacagaggtaaagtattgatcaacgattac
taccaaactaacattccttcagtgtatgcaatcggtgatatcgttaaaggtcctgcttta
gcacacgttgcttctcacgaaggtattatctgtgttgagaaaatcgctggtttaactcct
gaacctatgaactacggtaacatcccaggctgtacttacacagttcctgaagttgcttca
gtaggtatgacagaagaaatggcgaaagaagctggttatgaagtgaaagtgggtaaattc
ccattctctgcatcaggaaaagcttcagctgctggtcataaagaaggtttcgttaaagta
atctttgatgctaaatatggtgagtggttaggatgtcacatgattggttctaacgttaca
gaaatgattgctgaggcagttgttggacgtaaattagaagtaactggacacgaaatcatc
actgcagttcaccctcacccaacattatccgaagcggtaatggaggcagctgctcaagct
tacgacgagtgtatccacttgtaa

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