Flammeovirga sp. MY04: MY04_3571
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Entry
MY04_3571 CDS
T04442
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
flm
Flammeovirga sp. MY04
Pathway
flm02010
ABC transporters
flm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MY04_3571
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MY04_3571
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
flm01002
]
MY04_3571
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flm02000
]
MY04_3571
Peptidases and inhibitors [BR:
flm01002
]
Cysteine peptidases
Family C39
MY04_3571
Transporters [BR:
flm02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
MY04_3571
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
ABC_ATPase
AAA_21
AAA_29
AAA_22
Peptidase_C39_2
AAA_23
DUF87
RsgA_GTPase
ATPase
Terpene_synth
DUF956
AAA_16
nSTAND3
AAA_25
Zeta_toxin
AAA_15
Motif
Other DBs
NCBI-ProteinID:
ANQ50919
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All DBs
Position
1:4514823..4517018
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AA seq
731 aa
AA seq
DB search
MKLTKLKVKQRDITDCGAACLLCVSRYYGADFSVAKIRQLASTDQKGTNLLGLIEAAKKI
GLDAKGVKGNIEVLPEATFPAIAHMVLQNGLHHFVVITEVKKDKVTVMDPGDGQFHSYSK
EKFTQLWSGVLLLITPSVNFEKKNESVSIGLRFWDLINVHKSVLIQAIIGALVFTILGLS
TSIYIQKIVDYVLVDGNKNLLWLLSIGMFVILIFQLIIGALKSQLVLRTGQMIDARLILG
YYQHLIKLPQRFFDTMRVGEIVSRINDAVKIRAFINDSGISIVINVCILIFSFFAMFIYS
WKLAIIMFAILPISGGLYAFVNYRNKKYQRKLMESSAELESQLVESIDSIRTIKRMGIEN
FANLKTEIKFIDTLKNVFSTAQTHIFSENATHFVSVSFTIIILGVGAHFVLNQELTPGEL
LSFNALLNYLTGPVGALISMNSQWQDAKIAADRLFELMDLDNEQVSDEREKITLTVEKVD
TIIFQNVHFRYGSRVDVFEDLNLSIPKGKMTAIVGESGSGKSTIAALLQKIYPIQKGQIL
LGDTNLNYYTKSSIRQVIGVVPQNIELFKGSVLENIALGDLQPNVEKVIGICKDLGILSF
IESLPNGFQTEVGEKGASLSGGQRQRLAIARALYRDPQVLILDEPTASLDSKSEQYVQGA
IQFLLQQGKTIIVIAHRLSTIQHADKIIVLDNGHLEEEGIHYDLLSRNGKYKELWASQIP
SNIQELLQVPN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgacaaaattaaaagtcaaacaaagagacattacagattgtggtgctgcttgt
ttgttgtgtgtgtcccgatattatggtgcagatttttcagtagccaaaataagacaattg
gcttctactgatcaaaaaggaacgaatcttttaggtttaattgaagcagcaaaaaaaata
ggattagatgcgaaaggagttaagggtaatattgaagttctccctgaagctacttttcct
gccattgcacatatggttttacaaaatggtttacatcattttgtagtcattacagaagtg
aaaaaggataaagtgaccgtaatggatccaggggatggacaatttcattcctattctaaa
gaaaagtttactcagttatggtctggagttttattactcatcacaccatcagttaatttt
gagaaaaaaaatgagtctgtatcaattgggctaagattttgggatttaatcaatgtacat
aaaagcgtactcatacaagccattattggagcattagtttttacaatattaggattaagt
acatccatttatatccaaaaaattgtggactatgtattggtagacggaaataaaaattta
ctgtggcttttaagcataggtatgtttgttattttaatttttcaactcattataggagcc
ttaaaaagccaattagtacttagaacaggtcaaatgattgatgctcgattgatattgggt
tattatcaacatttgataaaactgccccaacgtttttttgatacaatgagagttggtgaa
attgtatctagaattaatgatgcagttaaaatacgtgcatttattaatgatagtggaata
tctattgtaattaatgtatgtattttaattttctctttttttgcaatgtttatctattct
tggaaactagcaattattatgtttgctattttacctatttcgggaggactttatgctttt
gttaattatcgaaataaaaaatatcaaagaaaattaatggaaagtagtgctgaattagag
tctcaattagtagaatccattgattctattcggacaatcaaacgaatgggaattgaaaat
tttgccaacctaaaaacggaaatcaaatttattgatacacttaaaaatgtttttagtact
gcacaaacacatattttctctgagaatgctacacatttcgtatctgtatcttttactatt
attattctaggagttggagcccattttgtgctaaatcaagaacttacccccggagaatta
ttatctttcaatgctttgttaaattacttaacaggtcctgtcggagcattaattagtatg
aattcacagtggcaagatgctaagattgcagcagatcgattatttgaattaatggatttg
gacaatgaacaagtgagtgatgagagagaaaaaatcacactaactgtagagaaagtagac
actattatttttcaaaatgttcactttcgttacggttcaagagttgatgtatttgaagat
ttaaatttatctatcccaaaagggaaaatgactgcaatagtaggagaaagtggttcaggg
aaatcaacaattgctgctttattacaaaaaatatatccaattcaaaaaggacaaatttta
ttaggtgatactaacttaaattattacacaaaatcttcaatacgtcaagtaataggtgta
gtacctcagaatattgagcttttcaaaggtagtgtcttagaaaatattgctttgggagat
ttacagcctaatgtagaaaaagtaataggtatttgtaaagatttaggtattctttcattc
atagaatctttacctaatggttttcaaacggaagttggagaaaaaggagcatctctttca
ggaggacaacgtcaacgactagcaattgcaagagctttataccgtgatccgcaagtgttg
atattggatgaacctacggcatcattagatagtaaatcggaacaatatgttcagggagca
atacagtttttattacaacaaggaaaaactatcattgttattgcacaccgattatctacc
atccagcatgctgataagattattgtattagataatggacatttagaagaagaaggtatc
cattatgatttattgtcgagaaatggtaagtacaaagaattatgggcttcccaaatacct
tccaatattcaagaattacttcaagtaccaaactaa
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