Flammeovirga sp. MY04: MY04_3665
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Entry
MY04_3665 CDS
T04442
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
flm
Flammeovirga sp. MY04
Pathway
flm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MY04_3665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
flm03021
]
MY04_3665
03400 DNA repair and recombination proteins [BR:
flm03400
]
MY04_3665
Enzymes [BR:
flm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MY04_3665
Transcription machinery [BR:
flm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MY04_3665
DNA repair and recombination proteins [BR:
flm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MY04_3665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Fungal_KA1
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ANQ51013
LinkDB
All DBs
Position
1:4612092..4613087
Genome browser
AA seq
331 aa
AA seq
DB search
MSILAFQKPDKLVKESADEFKGLFEFKPLEKGYGVTVGNALRRILLSSLEGYAIVGIKFP
NVLHEYSTIDGVVEDVTEIILNLKKVRFKAEVENPSQKININISGKSEFKAGDIAQFTEE
YKVLNPDFTICNLDESVNLQVEFTMMNGRGYLSADEQAESEADDIVGFIPIDAIFTPVKN
VRYHVEDFRVDDRTDFEKLVIEVITDGSVEPEESLKDAANILIQHFMLFSDNNMIIDDGG
NDAQVEIDDEYLRMRKLLKTSLSDLDLSVRAYNCLKAADVKTLGDLASLEISDMMKFRNF
GKKSLTELEQLMTDKKLSFGMDVTKYRLDED
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtccattcttgcttttcaaaaacctgacaagttggtaaaggaatcggctgatgaattc
aaaggccttttcgaattcaaacctcttgaaaaaggatacggcgtaacagttggtaacgct
cttagacgtatattactttcgtcgcttgaaggatatgctatcgtgggtatcaaattccca
aatgtacttcacgaatattcgactatcgatggcgttgtagaagatgtgactgagattatc
ttaaacttaaagaaagttcgctttaaggctgaggtagaaaatccgtcgcaaaaaatcaac
atcaacatcagtggtaaaagcgaatttaaagcgggtgatattgctcagttcacagaagaa
tataaagtccttaacccggattttacaatttgtaacttagacgagagcgtaaatcttcag
gttgagttcacaatgatgaacggccgtggatacttatctgcagacgaacaagctgagagt
gaagctgatgatattgttggttttattccgattgatgcaatcttcactccagtaaaaaat
gttagataccatgttgaagactttagagttgacgaccgtactgactttgagaaattggtg
attgaagttattactgatggttctgttgagccagaggagtctttaaaagacgccgctaat
atcttgatccaacactttatgttgttctctgacaataatatgattattgatgatggagga
aacgacgctcaagtggaaattgatgatgaatacttaagaatgcgtaagcttcttaaaaca
tcattatctgatcttgatttatcagttcgtgcatacaattgcttgaaagctgcagatgtt
aaaactttgggagatttagcatctttagaaatttcagacatgatgaagttcagaaacttt
ggtaagaaatcacttactgagttagaacaattgatgactgataagaaattgtcatttggt
atggatgtgactaaataccgtcttgacgaagattag
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