Flammeovirga sp. MY04: MY04_3790
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Entry
MY04_3790 CDS
T04442
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
flm
Flammeovirga sp. MY04
Pathway
flm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MY04_3790 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flm03400
]
MY04_3790 (priA)
Enzymes [BR:
flm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MY04_3790 (priA)
DNA repair and recombination proteins [BR:
flm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MY04_3790 (priA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
PriA_C
Zn_ribbon_PriA
WHD_PriA_bact
nSTAND3
HTH_65
nSTAND6
AAA_25
AAA_19
SLFN-g3_helicase
ATPase
AAA_30
NPHP3_N
DnaB_C
Trm112p
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ANQ51134
LinkDB
All DBs
Position
1:complement(4758105..4760588)
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AA seq
827 aa
AA seq
DB search
MKFAEVLLPVPIPKSFCYAIPPQLDLELVVGHRVLVEFGNRKMYTGIVSEIHQKVTEKYD
PKPILEVLEVEPSVLPSQIKLWQWVADYYMCSIGEVLNVALPSGLKLSSQSFLQIHPHFV
IEENLERLNDREFTLMSYLEKEQTIPYTQVGEILEIKSPYKTIKNLIEMEAILLIEKIKE
KYKPKMEKRLRLVQYYAEQPHLVDKLFEHLAKKTKQEDALLKYLSLVPIHDDHLLNFHGV
NKREFLHAGRPLSPSSVGTMTKNGIFEEFERQVPRFELSAADKVQPTPVLSPAQQECLEK
TIQGLNDKNVCLLHGITGSGKTEIYLQLIKSVIDNGEQALFLIPEIALTSQLVRRLKVYF
GDVLGIYHSKFSDNERVETWKGVQEDQFQVVVGTRSSLFLPFTDLSLIIVDEEHDSSYKA
HDPAPRYQGRDLALVLAHMHHAKVVLGSATPSLESYYLAAKKKYAYAGLHERFGDAQLPE
IKIIDIKEKRKQKKMMDDFSDDLLHELNNNTEQGYQSILFQNRRGYSPYVTCDVCNWVPS
CPSCNVKLTYHIYRNELRCHYCGHKEHVPHTCVSCGSTNMKTVGLGTQKIEEGLKTHLTD
IRVGRLDLDTTRRKHSYEQILTDFEEGHIDVLVGTQMVTKGLDFGNVRLVGIIDADTMLY
YPDFRAHERAFQLLTQVSGRAGRRGETGTVILQTHQPKETLFAKVARNDYRNFFRKEIKD
REQYHYPPYTRLIKLTVRSEKQDLTNQASEKLARLLVNWLGQKRILGPQEPGINKIRNYF
LSEILIKLEREGIDLKKAKGLIQKAILQQKEEKAFSRVWVSIDVDPQ
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgccgaggtcttattacctgtacctattccaaaaagtttttgctatgctatt
ccacctcaattagatcttgaattggtggtgggacatcgtgtgcttgtagaatttggaaat
agaaaaatgtacacgggtattgtctcggagattcatcaaaaagtaacagagaaatacgat
cctaaacctatactagaagttttggaggtagaaccaagtgtcctgccttctcaaataaaa
ctttggcaatgggtggccgactattatatgtgttctatcggcgaagtcctcaatgtagca
ctcccgtcaggacttaaactgagtagccagtcatttttacagatccatcctcattttgtc
attgaagaaaatcttgagcgtttgaacgatcgagaatttactttgatgagctatttagag
aaagaacaaaccattccttacacccaagtgggtgaaattttggaaatcaaaagtccttat
aaaactatcaagaatttgatagaaatggaggccattctcttgatagaaaaaattaaggaa
aagtataaacctaaaatggaaaagaggttgaggttggtgcaatattatgctgaacaacct
catctcgttgacaagcttttcgaacatctagccaaaaaaacaaaacaagaagatgcactg
ctaaagtacctttctttggtgcctattcatgatgatcaccttttgaattttcatggtgta
aacaaaagagagtttcttcatgctggtcgtcccctttcccctagttcggtgggaacaatg
accaaaaatggcatatttgaagagttcgaaagacaagtcccccgatttgaattatccgca
gctgataaagttcaacctacccctgtcttgtcacctgcccaacaggaatgtttagaaaaa
acgattcagggactgaatgataaaaatgtctgtttgctacatggaattaccggaagtgga
aaaacagaaatttatcttcagttaatcaaaagtgtaattgataacggtgagcaagcttta
ttcttgataccagaaattgcactaactagtcagttggtaagacggttgaaagtctatttc
ggtgacgtcttagggatctatcactccaaattttctgataatgaaagagtagaaacgtgg
aaaggcgtacaagaagatcaattccaagtagttgttggtacgagatcatcactattctta
cccttcacagatctttctttaattattgtcgatgaagagcacgatagttcatacaaagca
cacgaccctgccccacgttatcagggtagagatttggctttggttttggctcatatgcat
catgcaaaagtagttttgggatcagctactccttctttggaatcctattatttggcggct
aagaaaaagtatgcttatgcagggcttcatgaacgttttggagatgctcaattgccagaa
atcaaaatcatagatataaaagagaagcggaaacagaagaaaatgatggacgatttttct
gatgatctgcttcatgaactcaataataatacagaacaaggctatcaatctatcttattc
caaaatagaagaggttattccccttacgtaacatgtgatgtatgtaattgggtgccttct
tgtccaagctgtaatgtaaaactcacttatcatatttatagaaatgagctgagatgccat
tattgtggacataaagaacacgttcctcatacttgtgtttcttgtggttctaccaatatg
aagacggtaggattgggaactcagaaaattgaggaaggattaaaaacgcatttaactgat
attcgtgtggggcgtttagacctggataccacgagaagaaaacatagctacgaacaaata
ctcactgatttcgaagaagggcacattgatgtactggtaggtactcagatggtgaccaaa
ggattagactttggtaatgtacgattagttggtatcattgatgccgatactatgttatat
tatcccgattttagagctcatgaaagagcctttcaattactaacacaggtaagtggaaga
gcaggtcgtagaggagaaaccggtactgttatcttacaaacacatcaacctaaagaaaca
ctttttgctaaagtcgctcgaaacgattaccgcaatttctttagaaaagaaattaaggat
agggaacaataccattaccctccttacacgagattaatcaaattaactgttcgaagtgag
aagcaagatttaaccaatcaagcgtccgaaaaattagctcgactattggtcaattggtta
ggacaaaaacgtatcttaggacctcaagaaccgggtatcaataaaattagaaattacttc
ctctcagaaattttgatcaagttggagagagaaggaatcgacttaaaaaaggcaaaagga
cttatccaaaaagccattcttcagcaaaaagaagaaaaggcatttagtagagtttgggtg
agtattgatgtagatcctcaataa
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