Flammeovirga sp. MY04: MY04_4708
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Entry
MY04_4708 CDS
T04442
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
flm
Flammeovirga sp. MY04
Pathway
flm00061
Fatty acid biosynthesis
flm00071
Fatty acid degradation
flm01100
Metabolic pathways
flm01212
Fatty acid metabolism
flm02024
Quorum sensing
flm04146
Peroxisome
Module
flm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MY04_4708
00071 Fatty acid degradation
MY04_4708
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MY04_4708
09145 Cellular community - prokaryotes
02024 Quorum sensing
MY04_4708
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
flm01004
]
MY04_4708
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
flm04147
]
MY04_4708
Enzymes [BR:
flm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MY04_4708
Lipid biosynthesis proteins [BR:
flm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MY04_4708
Exosome [BR:
flm04147
]
Exosomal proteins
Exosomal proteins of breast milk
MY04_4708
Exosomal proteins of breast cancer cells
MY04_4708
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ANQ52043
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All DBs
Position
2:934564..936369
Genome browser
AA seq
601 aa
AA seq
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MSHTSHLVHKIRTQVEKLNTKEAARFRVADNLWESISWADFGSEIDAVSKALISNGIGVQ
DKVGIYAQNMPFWTVADFATQQMRGVAVSIYATSTSHQAAYIINDAQIKVLFVGDQEQYD
NAIEVFDRCESLTHIVAMKKETHLRHHKAGIQWVDFLETASSDVEEEFNQRINDANFDDL
ATLIYTSGTTGEPKGVMLDYNNFISQFDAHTVLVDFNEGDVNLSFLPLSHVFERTWSMYV
FYNGGTNCYLEDVKQIKEALVEAKPHVMCAVPRFYEKIFSAIHDKVAKAKPTTQKLFHWA
VGMGKKAFDAKQEGTTLGTFDKMKFNLATKLVLSKFQKLLGGNIRFMPAGGAKLDPEIGT
FFHSIGIPIILGYGLTETTATVSAWHLNEKFYTSTIGTTMPGCDIKIDEATGEILVKSKV
VMKGYYNKPEETAKVFTEDGYFKTGDKGEFDEKGNLLITDRIKELMKTSNGKYIAPQLVE
GKIGKDHFVEQIATIADARNFVSALIVPTFESLEEYAKEHNISYSSKEELIKDSKIIRMY
ESRIEKAQHDLANFEKVKKFTLLPKEFSQEKGEMTPTLKLKRKTIDENYKAEIDEMYAAS
R
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatacatcacacttagtacataagattagaactcaggtagagaaattaaatacc
aaagaggcggcacgttttagagtagccgacaatctttgggaaagcatttcatgggcagat
ttcggaagtgaaatcgatgcagtatcaaaagcattgatttcaaatgggattggtgttcaa
gacaaagtgggtatttatgcacagaacatgcctttctggacagtagcagatttcgctact
caacaaatgaggggggtagctgtatcaatttatgcgactagtacatcacatcaagcggct
tacatcattaatgatgcacagattaaagtactttttgttggtgatcaggaacaatatgat
aatgctattgaagttttcgatagatgtgaatcgttgactcatatagttgcaatgaaaaaa
gaaacacaccttcgccaccacaaggctggtattcagtgggttgatttcttagaaacagca
tcttcagatgtagaagaagaatttaatcaacgtattaacgatgctaattttgatgattta
gctacattaatttatacatcaggaactactggagaaccaaaaggtgtaatgttggattac
aacaatttcatttcacaatttgatgcacacacagtattagttgattttaatgaaggcgat
gtaaacctaagtttcttgccactttctcacgtttttgaaagaacatggtcaatgtatgtt
ttctataacggtggtacgaactgctatttagaagatgtaaaacaaataaaagaagcatta
gttgaagcgaaaccacatgtaatgtgtgctgtacctcgtttctatgaaaaaatcttctct
gctattcatgataaagtagcaaaagcgaaacctaccacacaaaagcttttccattgggct
gtaggtatgggtaaaaaagcgtttgatgcaaaacaagaaggaacgactttaggaactttc
gataaaatgaaatttaatttagcgacaaaattagtgctaagtaaattccaaaaattatta
ggaggtaatattcgctttatgccagcaggtggagcgaaattagatccagaaattggtact
ttcttccattctatcggtatcccaattattttaggatatggtcttactgaaacaactgca
acagtttcagcatggcatttaaatgaaaaattctatacaagtacaattggtactactatg
cctggttgcgatatcaaaattgatgaagctacaggtgaaatcttagtaaaatctaaagta
gtgatgaaaggttattacaataaaccagaagaaactgctaaagtatttacagaagatggc
tacttcaaaacaggtgataaaggagaatttgatgaaaagggtaacttattgattactgat
cgtatcaaagagttaatgaaaacatcaaatggtaaatatatcgcacctcaacttgttgaa
ggtaagattggtaaagatcattttgtagagcaaattgctacaattgctgatgcaagaaac
tttgtgtcggcattgattgtacctacatttgagtcattagaagagtatgccaaagagcat
aatatctcttactcatcgaaggaagaattgattaaagattctaaaattattagaatgtat
gaatcaagaatagaaaaagcacaacatgatttggctaatttcgaaaaagtgaaaaaattc
actttacttccaaaagagttctctcaagaaaaaggagaaatgacaccaacattgaagttg
aagagaaaaacaattgacgaaaactacaaagcagaaattgatgaaatgtatgctgcttct
cgttaa
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