Flammeovirga sp. MY04: MY04_5004
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Entry
MY04_5004 CDS
T04442
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
flm
Flammeovirga sp. MY04
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
flm03000
]
MY04_5004
Transcription factors [BR:
flm03000
]
Prokaryotic type
Helix-turn-helix
LacI family
MY04_5004
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
LacI
HTH_24
HTH_23
HTH_10
HTH_38
HTH_3
MarR_2
HTH_Tnp_ISL3
Sigma70_r4_2
Sigma70_r3
HTH_IclR
Sigma70_r4
HTH_5
HTH_7
HTH_11
HTH_28
MarR
HTH_17
HTH_36
PcrB
HTH_26
HTH_20
Fe_dep_repress
CUB_M02D8_5_6th
HTH_Tnp_4
HTH_Tnp_Tc3_2
HTH_41
Motif
Other DBs
NCBI-ProteinID:
ANQ52339
LinkDB
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Position
2:complement(1314736..1315779)
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AA seq
347 aa
AA seq
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MKNRKPTIKDIARRLDISVSTVSRALRNADDINPVTKRKVLELAEKIGYKKSVLAAGLAS
KKSFLIGVIIPEITVPFFGNVIIGIEEFLKPLGYDLIILHSDENVTNESECIDLLMDRQV
DGIMISLSMNTKNDDHLKRAMEQEIPVVIFDRYLPDSILPIPRVIIDDFDAGYQATTHLI
NKGYKRIAFITGPVDMFISQQRQEGYIRAMERNGRSTSADLIVPATDLRRSVGTALDKLM
VLKDKPDAILAFNDPIAFKLMRLLHKRDIKIPKEVAVMGISGDAMGELFYPSLTTISQPA
KDMGYWAANLLKDRMDAMKKAKDDGKVFIPMSIQKILPIKLIEREST
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataggaagcctaccattaaggatatagcaagaagattagatatttcagtgtca
actgtctcaagggcactaagaaatgcagatgatattaatcctgtgaccaaacgcaaggtg
ctagaacttgccgagaaaatcggttataagaaaagtgtgcttgcggctggattagcgagt
aaaaagtcctttttaattggcgtaatcataccagaaatcacggttccctttttcggtaat
gttattataggtattgaagaattcttaaaacctcttggttacgatttgattattctgcac
tcagatgagaatgtaaccaacgagagtgaatgtatcgatctattaatggatagacaggta
gatggtataatgatatcattatcgatgaataccaaaaacgatgatcatttaaaaagggca
atggaacaagaaattcccgtagtgatatttgaccgttatcttccggattcaattttacct
attccaagagtaattattgatgacttcgatgcaggatatcaagcaaccacacatcttatt
aataaaggatataaaagaatagcatttataacaggtcctgttgacatgtttatttcccag
caaaggcaggagggatacatcagggcaatggagagaaatggccgttcaacatcagcagat
ttgattgtgcctgcaactgacctaagaagaagtgtaggtaccgctttagataaactgatg
gttttaaaagataaacctgatgctattttggctttcaacgatccaattgcttttaaactg
atgcgtctattgcataaacgtgatattaagattccaaaagaggtagcagtaatgggtatt
tctggtgatgcaatgggagagttgttttacccaagtttaaccactatctctcaaccggcg
aaagatatgggttattgggcggcgaacttattaaaggatcgtatggatgccatgaagaaa
gcgaaagatgatgggaaggtatttataccaatgtcaattcagaagattctaccaattaaa
ttgatcgagagagaaagtacatga
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