Flammeovirga sp. MY04: MY04_5057
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Entry
MY04_5057 CDS
T04442
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
flm
Flammeovirga sp. MY04
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flm02000
]
MY04_5057
Transporters [BR:
flm02000
]
Other transporters
Pores ion channels [TC:
1
]
MY04_5057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
Plug
CarboxypepD_reg
TTR_TEN1-4
CILP
Motif
Other DBs
NCBI-ProteinID:
ANQ52392
LinkDB
All DBs
Position
2:complement(1399901..1403011)
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AA seq
1036 aa
AA seq
DB search
MNGYYSITRKFKVGIIFSITLLLFSFTNLYAQNRVISGKVIGQDDNLPLPGVNVTLQGTT
TGTITDFDGNFSIVVEDGNVLVFSFIGMKTKTVTIKSQSTLNVTLESEVEMLDEVVKIGY
GEQKKKEVSGAVAHVKAENLEQMTTSDLGDALQGQVAGVSVTAASGAPGESAVIQIRGVS
TLSEVEGANQPLYVVDGIPQNEDPRLAPNEIASIDILKDLASCAVYGTRGANGVILITTK
TGNQGKLKVSIDGNYGVRKIITNTPLMNASEQAYFDILHQRALNPGISDDEINMLVSRNK
NNYKNDNNLDDIVFEDYAPTQQYNINLTGGSSAGFTYNLTGGYYGQKGNVINSNFERLNF
RGGSSYKSDKWTINTSLALSTEDRQRPSGNLLNQTIRYKPYMAPLDPEKNIYEGASDQEA
MQANFLYQALYFQDDESRDRLSGNISIKYDFTDWLSFTTNAGGNIMNRYRNRLNPYFKVV
NQQTGKEFSNPNNSYYSEAVERSTGFSWDGRLFAKKSFGDHTVSALIGASMEEYGGQSHT
VQRRGIVDNDKPGFGSATLETTVTPGFNYAYKIIGTIGRLQYDYKGKYLLSLSGNYNGNS
KFAENNKFKFFPSASVGWNVSEEDFFADFRSTMNMFKIRASHGNVGGQSFRPYADLPTIR
RGFDYSFNGQVYSGAAQAAFANPDIQWETSIQNNIGVDMAFFDNRLTFNADVYHTTKQDM
LFPIATPASAGSSAGSNNDKLVTLNVGNMVNQGLELALGYKGRFKKLNWNITGTFATNSN
EITNMNSEDFVYTADQGLIYGATNQSRVTAYATGHEAGAFFLYKTEGIINSEEKLAEYQK
VNPAARMGDLMIRDTNGDGQITEADKVYAGSGLPKYEAGFILNLRYKNWDFMMNWYGAFG
HEIMNGSKLMAYSEGRHLDQIHTYSADNPYSPIPAYRGDLKQGTTNFRGDTDLWLEDGSY
LRLKNVTLGYTIPRNKLKKAGIDQVRFYIRAQNPLTFTKYTGYDPEVGGNGVSSRGLDKG
NYPIAALYSTGFRFNF
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgaatggatactactcgataaccagaaaatttaaggtagggatcatcttttctattact
ctattactattctcttttactaatctctatgcacaaaatagagtgatctccggtaaggta
ataggacaagacgataatctaccccttccaggagtaaatgtcactctacaaggaactact
acaggtaccattaccgacttcgatggtaacttttcaattgtagtagaagatggaaacgta
ttagtgttttcatttataggtatgaaaacgaaaaccgtgactattaaatctcagtctact
ttaaatgttactttagaaagtgaagtagaaatgttggatgaggtagttaaaatcgggtat
ggtgagcaaaagaagaaagaagtttcgggtgcagtagcacacgtgaaggctgaaaactta
gagcaaatgaccacttccgatttaggtgatgcattacaaggacaagtagccggtgtgagt
gtgactgctgcttcgggtgctccaggtgagagtgcggtaattcaaatcagaggtgtaagt
acactatctgaggtagaaggagccaaccaaccattatatgtggtcgatggtattcctcaa
aatgaagatccccgattagcacctaacgaaattgcgagtattgatatccttaaggatctg
gcttcttgtgcggtctatggtactcgtggtgcaaatggtgtaattttgattactactaag
acaggtaatcaaggaaaattaaaggtgtctattgatggtaactatggtgtgagaaagatc
attaccaacactccattaatgaatgcctcagaacaagcgtatttcgacatcttacatcaa
agagccttaaatccaggcatttctgatgatgagatcaatatgttggtatcaagaaataag
aacaactacaaaaatgataataacttagacgatatcgtttttgaagattatgcaccaaca
caacaatataacatcaacctaacaggtggttcaagtgcaggatttacttacaacttaaca
ggtggttattatggtcagaaaggtaacgtcatcaactctaattttgaaagattgaacttt
agaggtggttctagttacaaatcggataaatggacaatcaatacttcattggccttgtct
acagaagatagacaacgtccaagcggtaacttattgaatcaaacgattcgctacaagcct
tacatggcgccactagatcctgaaaagaatatttacgaaggagcatcggaccaagaagca
atgcaagccaacttcttgtatcaagcattgtatttccaagacgatgaatcgagagaccgt
ttatctggtaatatcagtatcaaatatgattttaccgattggttatcatttactaccaat
gcaggtggtaatattatgaaccgatacagaaaccgattaaacccttattttaaggtagtg
aaccaacaaacagggaaagaattctctaaccctaacaattcgtactattcggaagcagtg
gagagatcgacaggttttagctgggatggacgtttattcgctaagaaatcattcggagat
catacggtttctgctttgattggtgcttcaatggaagagtatggtggacaaagtcatact
gtacaaagaagaggtattgtagataacgataagccaggctttggatcggcaactttggaa
acaacagtgactccagggtttaactatgcctacaaaatcattggtacaattggtcgttta
caatacgattacaaaggcaagtacttactatcgttaagtggtaactataacggtaactca
aagtttgcagaaaacaacaaatttaagttcttcccatcagcatcagtaggttggaacgtt
tctgaagaagatttcttcgctgattttagatcaacaatgaacatgttcaaaattagagca
tctcatggtaacgttggtggacaaagctttagaccttatgccgatcttccaacgatcaga
agaggatttgattatagctttaatggacaagtgtatagtggtgctgctcaagcagcattt
gctaaccctgatattcagtgggaaacatccatccaaaataacattggtgtagatatggca
ttttttgataaccgtttaacattcaatgcagacgtttaccacaccacaaaacaagacatg
ttattcccgattgccacgccagcatcagcgggttcttcagcaggaagtaacaacgataaa
ttggtgacactaaatgtgggtaacatggtgaaccaaggtcttgaattggcactaggttac
aaaggtagattcaaaaaattgaattggaatattacaggtacttttgctacaaatagcaac
gagatcacaaacatgaactcggaggactttgtatacactgccgatcaaggtttgatctat
ggtgctactaaccaatcgagagtgacggcttatgcgacaggtcatgaagcaggtgctttc
ttcttgtacaaaacagaaggtattatcaactctgaagagaaattggcagaatatcaaaaa
gtgaaccctgctgctagaatgggcgacttgatgattagagataccaacggggacggtcag
attactgaagcagataaagtatatgcaggtagtggtcttccgaaatacgaagcaggtttt
atcctaaatcttcgttataaaaactgggactttatgatgaactggtacggagcttttggt
catgaaatcatgaacggtagtaagttaatggcttactcagaaggtagacacttggatcag
atccatacctactcagctgataatccatattctccaattccagcatatagaggtgattta
aaacaaggtacgaccaactttagaggagatacagacctttggttggaagatggttcttat
ttgagattgaaaaacgtaacgttaggttacactattcctaggaacaaattaaagaaagcc
ggtatcgatcaagtgagattctacattagagctcagaacccactaacatttacaaaatac
acaggatatgatcctgaagtaggtggtaacggggtatcatcaagaggtttggacaaaggt
aactatccaattgccgcgctttactcaacaggttttagattcaacttctaa
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