Flammeovirga sp. MY04: MY04_5359
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Entry
MY04_5359 CDS
T04442
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
flm
Flammeovirga sp. MY04
Pathway
flm03030
DNA replication
flm03430
Mismatch repair
flm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MY04_5359
03430 Mismatch repair
MY04_5359
03440 Homologous recombination
MY04_5359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flm03032
]
MY04_5359
03400 DNA repair and recombination proteins [BR:
flm03400
]
MY04_5359
Enzymes [BR:
flm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MY04_5359
DNA replication proteins [BR:
flm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MY04_5359
DNA repair and recombination proteins [BR:
flm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MY04_5359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ANQ52691
LinkDB
All DBs
Position
2:complement(1920078..1920656)
Genome browser
AA seq
192 aa
AA seq
DB search
MEKQITSDFLVLDTETTGLDAGVDEALQISIINSDKEVLLNTYLKPKYRRSWPEAMSVNG
ITPEMVEDAPTYDFAMQDMINDIVEDKNVILYNAAFDLNFVDLTNAKGVFCAMKVFSTEI
VKEWHEKYNDYRWQRLSTAFNHFSDMQSLEDKILLDNSHNSLSDSFMTLYVWQKMMELGY
DKGKNYLLTNKI
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcaaattacttctgattttttagttttagatacagaaactacgggcttagac
gctggtgtagatgaagctttacaaataagcattatcaacagtgataaggaagtacttctg
aatacttatttaaaaccaaaatatagaagatcttggcctgaagcaatgagtgtcaatggc
ataacgcctgaaatggtagaggatgcaccgacatacgatttcgcaatgcaggatatgatt
aacgatattgtagaggataaaaatgtaattctttacaacgcggctttcgatctaaatttt
gtagacttaaccaacgcaaaaggggtattctgtgccatgaaagtattttctacagaaatt
gtgaaagagtggcacgaaaaatacaacgattaccgttggcaacgtttatcaactgctttt
aaccacttttctgatatgcagtctttggaagataagatcttattagacaattctcataat
tcactatcggatagcttcatgacgctatacgtttggcaaaaaatgatggaattaggatac
gacaaaggaaagaactatctattaacgaataaaatatag
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