Filimonas lacunae: FLA_0313
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Entry
FLA_0313 CDS
T05172
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
fln
Filimonas lacunae
Pathway
fln02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FLA_0313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fln03021
]
FLA_0313
Transcription machinery [BR:
fln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FLA_0313
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
HTH_20
HTH_23
HTH_Tnp_ISL3
PhyR_sigma2
GerE
Motif
Other DBs
NCBI-ProteinID:
BAV04326
UniProt:
A0A173M9W2
LinkDB
All DBs
Position
371862..372437
Genome browser
AA seq
191 aa
AA seq
DB search
MTHDLVAIQKRIALGEEQALAELCRLLQTKLQQFAVTLVRSREQAEEIVEDVLVKLWYNR
QNIAAIENLTVYLYVAVKNQSLNALSHKAKELITASYDQLDINLTHTAVSPHDLLVTAEM
MQRMQQAVDALPPRCKMIFKLVREDGLAYKEVADILNISINTIDAQMAIAVKRIAAAVAV
QKPSFRNPFLS
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgacacatgatttagtagccatacagaagcgaattgctttaggtgaagagcaggcgtta
gccgagctttgccgcttgctgcaaaccaaattgcagcagtttgcggtaacgttggtgcgt
tcgagggagcaggcagaggaaatagtagaagatgtgctggtaaagctttggtacaaccgc
caaaacatagcggccatagaaaatctgacagtttatttatacgtagccgttaaaaaccag
tcgttaaacgccctgtcgcataaagccaaagaactcatcaccgcttcttacgatcagctc
gatattaatttaacccatacggctgtttcgccccacgatttactggtaactgctgaaatg
atgcaacggatgcagcaggcagtagatgcattaccaccccgctgtaaaatgatttttaaa
ctggtgcgggaagatggtttggcctataaagaagtggccgatattctcaacatttctatc
aataccattgatgctcagatggctattgccgtaaaaagaattgcggctgcagtggccgtt
cagaagccttctttccgaaatcccttcctttcttaa
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