Filimonas lacunae: FLA_0533
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Entry
FLA_0533 CDS
T05172
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
fln
Filimonas lacunae
Pathway
fln02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FLA_0533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fln03021
]
FLA_0533
Transcription machinery [BR:
fln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FLA_0533
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
UPF0122
Sigma70_r2
HTH_23
DUF1804
PF0610-like_N
GerE
Sigma70_ECF
HTH_11
HTH_38
HTH_24
HTH_17
HTH_28
Terminase_5
HTH_5
DUF722
HTH_10
HVO_A0261_N
DUF7769
HTH_AsnC-type
MarR_2
Motif
Other DBs
NCBI-ProteinID:
BAV04541
LinkDB
All DBs
Position
628003..628506
Genome browser
AA seq
167 aa
AA seq
DB search
MAFEILYRRLWVEMYDTAYQRLKNDAQAEDIVQDVFTSLWTRRASLNIDNVTGYLHTAVR
FKVFNYVQRGAAHSFLEPFQSLASPANADDKLLEKELSALLAAYEAALPDKRRKIFQLYF
HERLSTREIADMLDISQKTVQNQLGTTLQDLRAGVLPLLILLTSTLK
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atggcctttgaaatattgtatcggcgattatgggtagagatgtatgatactgcttatcaa
cgtttaaaaaacgatgcccaggcggaagatatagtacaggatgtgtttaccagtttgtgg
acacgccgtgcttctcttaatatagacaacgtaacggggtatttacatacagctgttcgt
tttaaagttttcaactatgtgcagcggggggctgcacatagttttttagaacctttccaa
tcccttgccagcccggcaaacgccgatgataaattgctggaaaaagaactcagcgcctta
ctcgctgcctacgaagccgctttacctgacaaacggcgcaaaatatttcaactgtacttt
cacgaacgactttctacccgcgaaatagccgatatgctcgatatttctcaaaaaacagtg
caaaaccagctgggaactaccttacaggacctgcgcgcaggtgtattaccactgctgata
ttactgacttccaccctcaaataa
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integrated database retrieval system
