Filimonas lacunae: FLA_0982
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Entry
FLA_0982 CDS
T05172
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
fln
Filimonas lacunae
Pathway
fln02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FLA_0982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fln03021
]
FLA_0982
Transcription machinery [BR:
fln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FLA_0982
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
HTH_24
HTH_11
HTH_20
Sigma70_ECF
HTH_23
SusR_C
HTH_AsnC-type
HTH_38
HTH_5
HTH_40
DUF6291
HTH_29
Motif
Other DBs
NCBI-ProteinID:
BAV04977
UniProt:
A0A173MBR5
LinkDB
All DBs
Position
1160111..1160701
Genome browser
AA seq
196 aa
AA seq
DB search
MEYQLWSDKELLAACAQDRIQAFNVLFDRYSGKLYQYALSYVKDEHMAEEAMMDVLLWIW
NKRQELSIEGEFNSYVFRAVKNATIKVLRKKALAAASMEEVENDARFATEHADQLLQHKE
LEQQYINSLSQLSPQRRLVFAMSREGNLSHAEIASKLDLSVNTVKNHIKASLSHFREQMD
QYSHILLPLGMLLLLR
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggaatatcaactttggtcggacaaagagttattggcagcatgtgcgcaggatcgcata
caggcctttaatgtgttgttcgacaggtattccggtaagttatatcagtatgcgctcagc
tacgtaaaagatgaacacatggccgaagaggcgatgatggatgtgctgctgtggatatgg
aacaaacggcaggagctttctatagaaggcgagtttaacagctatgtgtttcgtgcagta
aaaaatgccactatcaaagtgttacgcaaaaaggcgctggcagctgcatcgatggaagaa
gtagaaaacgatgcccgttttgccacggagcatgccgatcagttgttacaacataaagag
ctggaacagcagtatatcaatagcctttcccaattaagtccgcagcgccggctggtgttt
gctatgagccgcgagggcaacctgtcgcatgcagaaatagccagcaagcttgatctttct
gtcaacaccgtaaaaaatcatatcaaagcatctctaagtcatttccgcgagcagatggat
cagtatagtcatatcctgttgccattgggtatgctgctattgttacgctaa
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