Filimonas lacunae: FLA_1109
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Entry
FLA_1109 CDS
T05172
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
fln
Filimonas lacunae
Pathway
fln02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FLA_1109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fln03021
]
FLA_1109
Transcription machinery [BR:
fln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FLA_1109
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
HTH_40
HTH_23
HTH_24
HTH_5
Terminase_5
DUF134
PF0610-like_N
UPF0122
HTH_11
CsiV
HTH_AsnC-type
MarR
HTH_36
DdrB
HTH_10
Motif
Other DBs
NCBI-ProteinID:
BAV05102
UniProt:
A0A173MC15
LinkDB
All DBs
Position
1307003..1307572
Genome browser
AA seq
189 aa
AA seq
DB search
MFTKQTNNEQELLHQLALDNEAAFTEIYHQYWRLLFSVAANKLGSAVDAEEMVQEVFADL
WRRRRELRIDISLKSYLAAAVKFQVYTFMSKKHRQEQHHAAYAQPDIQTITPEEELHSKQ
LLQQLYDITLQLPDKCRLVYQLSREEGYSNKEIAEKLSISEKTVESQMTKALKRLRGGFK
LLFTYLLSL
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
gtgtttacaaagcaaacaaataacgagcaggaactattgcatcaactggccctggacaac
gaagcggcctttactgagatttaccatcaatactggcggttattgttttctgtggcagct
aataagctgggcagtgcagtggatgcagaggaaatggtacaggaagtatttgccgatttg
tggcgtcgcagaagagagttgcgtatagatatttccctgaaatcgtacctggccgctgcc
gttaagttccaggtgtatactttcatgagtaaaaaacaccggcaggagcaacaccacgcc
gcttatgcgcagcctgatattcaaaccattactcccgaagaagagctgcacagcaaacaa
ttactacaacaattatatgatattacgttgcagcttcccgataaatgccggctggtttac
cagttaagcagggaggaaggctattctaataaagaaattgccgaaaaactatctatttca
gaaaaaacggtggaatcgcaaatgaccaaggccctgaagcggctgcggggtggttttaaa
ctgttattcacctacttactgtcgttgtaa
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