Filimonas lacunae: FLA_1133
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Entry
FLA_1133 CDS
T05172
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
fln
Filimonas lacunae
Pathway
fln02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FLA_1133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fln03021
]
FLA_1133
Transcription machinery [BR:
fln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FLA_1133
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_10
HTH_24
HTH_20
HTH_40
UPF0122
HTH_23
PF0610-like_N
IFT20
HTH_11
HTH_5
PCI
TPR-S
Motif
Other DBs
NCBI-ProteinID:
BAV05126
LinkDB
All DBs
Position
complement(1337929..1338489)
Genome browser
AA seq
186 aa
AA seq
DB search
MTTHPQYSKEELVLLLRSGNEHAFNQIYTLYWRKLYALAYQRLRNKQAAEDVVQEVLAGV
WQRRTTSLINNLEAYLATATRYAVIRQLGKEHAVTTETEQASDLTTDEMHDTRLLWHTLQ
KEIHKLPEKCRLVFQYSRELGLTNKEIADSLDISQKAVEKHITKAIRALRDHLKLFSFYV
IKIFSF
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgcatccacaatattctaaagaagaactggttttactgctgcgcagcggcaat
gaacatgcgttcaatcaaatctataccctttactggcgtaagctttatgcgctggcttat
cagcgcctgcgcaacaaacaagcagcagaagatgtggtacaggaagtgctggccggtgta
tggcagcgccgtaccacatcccttattaataacctggaagcctacctggctactgcaacc
cgctatgctgttatacggcagttaggaaaagaacacgccgttaccaccgaaacagagcag
gcatcagaccttaccactgacgaaatgcacgacacccgcttattgtggcatacgctgcaa
aaagaaattcataaacttcccgaaaaatgcaggctggtttttcaatacagccgcgagctt
ggcttaaccaataaggaaatcgccgactcactggacatttcacaaaaagctgtggaaaag
cacattaccaaagctattcgcgccttacgcgatcatctgaaacttttttctttctacgta
ataaaaatattttctttctga
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