Filimonas lacunae: FLA_1427
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Entry
FLA_1427 CDS
T05172
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
fln
Filimonas lacunae
Pathway
fln00040
Pentose and glucuronate interconversions
fln01100
Metabolic pathways
fln02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
FLA_1427
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FLA_1427
Enzymes [BR:
fln01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
FLA_1427
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pectate_lyase_5
DUF3515
Motif
Other DBs
NCBI-ProteinID:
BAV05420
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Position
complement(1752875..1753969)
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AA seq
364 aa
AA seq
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MYTAAIAAVMAVLALACKKSATTETTPLERQDLQATSAAAATCTAPGWASQNGGTTGGGS
ATATVVTTYAALKSAITSSSVKVIQVNGTITIPSGGRISFQDQSDKTIFGSAGAKLVSAD
QTKDNSGIIYIKRCTNIIIRNLIFEGPGAYDTDGWDNATLDACKNVWVDHCEFRDGVDGN
FDIKNTSNYITVSYTKFTYLKAPKAGGSGGSDDHRFSDLIGSSDGATADRGTLSITFARC
WWASGCVARMPRVRFGKVHIVNSLFNSTASKSCVQAGFEANLLIEANVFESVKNPIDLMD
NNSTAVQSKNNLFTSVTGTSAGNGVTAFTPPYSITTLGNSSVKSTVTASTGAGATLSGNT
CSSF
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtacacggcagcaatagctgctgtaatggccgtgctggccctggcctgtaaaaaaagt
gccactaccgaaactaccccattagagagacaagacctgcaagccaccagtgccgcagca
gctacctgcactgcaccaggctgggcttcgcaaaacggaggtactacaggaggtggcagt
gctaccgccactgtggtaaccacttatgccgcattaaagtcagctattaccagctccagt
gtgaaagtaatacaggtaaatggcaccattaccatcccttccggtggaaggatctctttc
caggatcagtctgataaaaccatctttggcagcgccggcgcgaaactggtatctgccgat
caaaccaaagacaattccggtatcatttatatcaagcgttgcaccaatatcattatccgc
aacctgatatttgaaggccccggcgcttatgatacagatggctgggacaatgccacgctg
gatgcctgcaaaaatgtgtgggtagaccattgcgaattcagagatggtgttgatggcaac
ttcgacatcaaaaacacctccaattacattaccgtttcttataccaaattcacttattta
aaagcccctaaagcaggcggatcaggcggttcggacgatcaccgcttttctgatctcatt
ggatccagcgatggcgctactgccgacagaggaactttaagcatcacctttgcacgttgc
tggtgggcatccggttgcgtagcacgtatgccacgtgtacgttttggcaaagtgcatata
gtaaacagtttattcaacagcacagccagcaaaagctgcgtgcaggccggctttgaagcc
aacctgttaattgaggccaatgtttttgaaagcgtaaaaaatcctatcgacctgatggat
aacaattctaccgctgttcaatctaaaaacaacctgttcaccagcgttacaggtaccagt
gccggtaatggagttactgcctttacgcctccttacagcattaccactttaggtaactcc
tctgtaaaatcaacggttactgcttctaccggtgcaggcgctaccttatcaggcaatacc
tgctcatcgttttaa
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