Filimonas lacunae: FLA_1697
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Entry
FLA_1697 CDS
T05172
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
fln
Filimonas lacunae
Pathway
fln02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FLA_1697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fln03021
]
FLA_1697
Transcription machinery [BR:
fln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FLA_1697
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
GerE
HTH_11
PF0610-like_N
HTH_40
HTH_23
HTH_24
DUF5725
HTH_ParB
HTH_Tnp_ISL3
DUF1492
M_C
HTH_10
HTH_Crp_2
HTH_29
PhyR_sigma2
HTH_5
DUF722
Motif
Other DBs
NCBI-ProteinID:
BAV05685
UniProt:
A0A173MDP4
LinkDB
All DBs
Position
2055816..2056385
Genome browser
AA seq
189 aa
AA seq
DB search
MIHKVNDNVLLDRLANGDEHALNEIYLLYWQDLFMCAYNVLKDKAACEDIVQDLFLQLWQ
KRSTIQINISLRAYLYTAVRYNVFRQIRTGKVRSVLFEEAAERMAANTTEFIMAEKEMSK
QVARVVAALPDKCREVYKLSREEQLTHKEIASRLNISTKTVENQLTIALKRVRASLNTIA
LIVVTLLAN
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgattcataaagtgaatgataatgtgctgcttgaccgtttagccaacggtgatgaacat
gcgttgaacgaaatttatctgctttactggcaggatttgtttatgtgcgcctacaacgtt
ttaaaagacaaagctgcctgcgaagacattgtgcaggatttgtttttacagctttggcag
aaaagatctaccatacagattaatatttcccttcgtgcttatttatacacagctgttcgc
tataatgtattcagacaaatacgtaccggcaaggtaagaagtgtattgtttgaagaagcg
gcagaacgcatggctgccaacaccactgaatttataatggcagaaaaggagatgagcaag
caggtagcacgtgtagtagctgctttgcccgataaatgccgcgaagtatataaattgagc
agggaagaacaacttacacataaagagatagcttcccgtttaaatatttctaccaaaaca
gtcgaaaatcaattaaccatcgctttaaaaagagtgcgcgcttcattgaacacaatagcc
ctgatagttgttaccctattagcgaattga
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