Filimonas lacunae: FLA_2867
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Entry
FLA_2867 CDS
T05172
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
fln
Filimonas lacunae
Pathway
fln02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FLA_2867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fln03021
]
FLA_2867
Transcription machinery [BR:
fln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FLA_2867
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
GerE
UPF0122
HTH_11
HTH_24
HTH_40
PF0610-like_N
PID3_N
HTH_10
HTH_23
DB_JBP1
AKAP7_RIRII_bdg
Motif
Other DBs
NCBI-ProteinID:
BAV06847
UniProt:
A0A173MH92
LinkDB
All DBs
Position
complement(3500930..3501475)
Genome browser
AA seq
181 aa
AA seq
DB search
MCNTLQDIKDGNLDSFRAAYQEYHVKLYYYAFKHTQSEYLAEETVQLSFIKLWEKRASLS
NHFDLSVQLFRIAKSIMIDLIRKQKVQQTHQHAFAETVAQYIETDLTPKYTLHKVYDHIE
KLSPLRKLVFKLNRFEGLSHKEIAEKLSISPKAVENQILRAVRQLKDALMLAFILWLQSR
R
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaatacattacaggatataaaagacggcaacctggacagttttagagctgcctac
caggaataccatgttaagctgtattactatgcattcaagcatacccagagcgaatacctg
gccgaggaaaccgtacaactgagttttatcaagttatgggaaaaaagagcttcgctttct
aatcatttcgatttgtctgttcagctgtttcgcattgctaaaagcattatgattgacctg
atacggaaacaaaaggtgcagcaaacccaccagcatgcttttgctgaaacagtggcgcag
tacatagaaacagatcttactccaaaatatactctacataaagtatatgatcatatagaa
aagttatcgcccctccgcaaactggtatttaagctcaatcgttttgaagggttgtctcat
aaagaaatagcagaaaagctttccatttctcccaaagctgtagaaaatcagatactgcgt
gccgtgcgtcagctgaaagatgcgctgatgctcgcttttatactctggctgcaatcccgc
cgttag
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integrated database retrieval system
