Filimonas lacunae: FLA_2972
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Entry
FLA_2972 CDS
T05172
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
fln
Filimonas lacunae
Pathway
fln02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FLA_2972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fln03021
]
FLA_2972
Transcription machinery [BR:
fln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FLA_2972
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_38
HTH_23
HTH_10
Sigma70_ECF
HTH_24
GerE
HTH_Tnp_ISL3
HTH_40
HTH_DeoR
HTH_28
HTH_29
HTH_AsnC-type
MarR
Motif
Other DBs
NCBI-ProteinID:
BAV06952
LinkDB
All DBs
Position
complement(3625517..3626062)
Genome browser
AA seq
181 aa
AA seq
DB search
MQQQATGGSREAFKAIYDKYWPDLFQAAYKRTRNADDARDLVQELFIALWDNPDRLLQET
DLGGYLFVALRNRIFNYFEKQTVRLNYLMAQPFKPVESEDAIFSTIRTREIKACVAAAVA
AMPPRMKEIYILSREQQLSIAEIAGLLGIAPQTVKNQLHTALEKIRTHLDSHNLGSFFFL
F
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
ttgcagcaacaagccactggcggcagccgggaggcctttaaagccatttacgataaatac
tggcccgatttgttccaggccgcctacaagcgcacccgcaatgccgatgatgcgcgcgac
ctggtgcaggagctgtttattgccctttgggataatcccgaccggctgctacaggaaacc
gacctgggtggctacctgtttgtggccctgcgtaaccgcattttcaactatttcgaaaag
caaactgtgcggcttaattacctcatggcgcagccttttaagccggtagagtcggaagat
gccattttcagcaccatccgcacccgcgaaataaaagcttgtgtggcagcggcagtagca
gccatgccgccacgtatgaaggaaatttatatactcagccgcgagcaacaactgagcatt
gctgaaattgccggcctgctgggtatagcgccacaaaccgttaaaaaccagttgcatacg
gcgctggaaaaaatacgcacccacctcgacagccataacctcggcagttttttctttctt
ttttaa
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integrated database retrieval system
