Filimonas lacunae: FLA_3323
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Entry
FLA_3323 CDS
T05172
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
fln
Filimonas lacunae
Pathway
fln02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FLA_3323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fln03021
]
FLA_3323
Transcription machinery [BR:
fln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FLA_3323
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
UPF0122
HTH_23
HTH_38
HTH_24
HTH_40
HTH_10
ADSL_C
HTH_17
Terminase_5
PhyR_sigma-like
HTH_28
Phage_SPbeta_YorH
DUF2316
HTH_11
HTH_5
HTH_7
wHTH_Par
HTH_29
Fe_dep_repress
CDT1_C
PF0610-like_N
Archease
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
BAV07300
LinkDB
All DBs
Position
complement(4056069..4056566)
Genome browser
AA seq
165 aa
AA seq
DB search
MKEGDEIAFRELYHAYSEVLYSFLVKLNVQREDIKDVIQQTFTKLWENRSGLKEGLSLKA
YLMTIAKNDIYNIVKKRLTEKKHQTAPQESEEPALQASEVRDLLYNILQELPHKRREVFT
MSRIEGYSNKEIAEMLNITKSTVENHINLSTRQLKGVLKKFGFSE
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagaaggcgatgaaattgctttcagagaattgtatcacgcttacagtgaggtgctg
tattccttcctggtaaagctgaacgtgcagcgggaggatataaaggatgtgattcagcag
acttttactaaactctgggaaaacagatcgggattaaaagaagggctttcgctgaaagcc
tacctgatgactattgctaagaatgatatttacaacatcgttaaaaaaagattgaccgag
aaaaaacaccaaactgctccgcaggagagcgaagaacctgctttgcaggcaagtgaagta
cgcgatctgctttataatatactccaggaactaccccataaaagaagggaagtgtttacc
atgtcacgcatagaaggttattcgaacaaggaaattgcggaaatgctgaacattaccaaa
agcacagtagaaaatcatattaacctctctaccaggcaattaaaaggagtgctaaagaag
tttggcttttcggaatga
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integrated database retrieval system
