Filimonas lacunae: FLA_3384
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Entry
FLA_3384 CDS
T05172
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
fln
Filimonas lacunae
Pathway
fln02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FLA_3384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fln03021
]
FLA_3384
Transcription machinery [BR:
fln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FLA_3384
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
GerE
HTH_23
HTH_40
HTH_11
HTH_20
DUF3489
HTH_10
HTH_24
HTH_DeoR
HTH_16
DUF722
HTH_3
GntR
HTH_7
HTH_Tnp_ISL3
DUF2774
TAN
TnsD
RPA_C
HTH_38
HTH_31
Mga
PF0610-like_N
ACT_phage
HTH_ParB
HTH_29
HTH_17
HTH_28
Sigma70_r3
HTH_5
Motif
Other DBs
NCBI-ProteinID:
BAV07361
UniProt:
A0A173MIW7
LinkDB
All DBs
Position
complement(4120681..4121277)
Genome browser
AA seq
198 aa
AA seq
DB search
MNRNLTYHNSELLERVAAGDNAAFTELFNQYWDNIYSVALVLTKSEAMAEDVVQEIFLKI
WNKRQELTAVTRFDNYLFILARNHIFSDFKKLRIRKEHAERLQHYFSGYEFTPEDQLMEK
EVSAILEAAVAGLSAQQQQVYRLNREQGLTYEQIAEELGISVHTVRNHMVRALKHIREYL
LPYNTNLIWLAALLRAFL
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
ttgaaccgtaaccttacatatcataacagcgaattactggaacgtgtggcggcaggcgat
aacgctgcctttaccgaactgttcaatcaatactgggataatatatacagcgtagccctt
gtgcttaccaagtcggaagccatggcagaagatgtagtgcaggaaatattcctgaaaata
tggaataagcgtcaggaacttaccgcagtaacccgttttgataactacctgtttatttta
gcgaggaaccatattttctccgattttaaaaagctgcgtatacgcaaggagcatgcagag
cggctgcaacactatttcagcggctacgaattcactcccgaagatcagctgatggaaaaa
gaagtatcggccatcctggaagccgctgtagccggactttctgcccagcagcagcaggtg
taccggttaaaccgcgagcaggggcttacttacgaacaaattgccgaagaactgggcatt
tctgtccatacagtgcgcaatcatatggttcgggcgctcaaacatatccgtgaatatcta
cttccctacaataccaatcttatctggctggcagcccttctccgggcttttttataa
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integrated database retrieval system
