Filimonas lacunae: FLA_3545
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Entry
FLA_3545 CDS
T05172
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fln
Filimonas lacunae
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fln03032
]
FLA_3545
03400 DNA repair and recombination proteins [BR:
fln03400
]
FLA_3545
Enzymes [BR:
fln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FLA_3545
DNA replication proteins [BR:
fln03032
]
Prokaryotic type
DNA Topoisomerases
FLA_3545
DNA repair and recombination proteins [BR:
fln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FLA_3545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
BAV07519
UniProt:
A0A173MJ63
LinkDB
All DBs
Position
complement(4307031..4308137)
Genome browser
AA seq
368 aa
AA seq
DB search
MGEAAIKLPHKAILAVHRNYKDAASVVKLVYVSDSLPGITRHKKGNGFGYTFSNKPLTNK
EELERIRKLAIPPAWENVWICALPNGHIQATGMDARKRKQYRYHAMWQVVRTETKFHHMY
EFGKALPALRLQLENDIAQKQLCESKVLATVVSLMERTFIRIGNNEYEKLNGSYGLTTLK
DKHVSFEGDKVRFSFIGKKGIDHDITLKSKRLAKIVKQCRDIPGKELFQYYDEEGKRHSI
DSGMVNNYIQAATGMDFTAKDFRTWAGSLLALQTLCSAGEVLSETEGKRNINSMLDEVSA
KLGNTRTVCKKYYVHPGLIRLYQEQKLTHYLKQLDQLEEPDQITGLTQDEQVLMKVLKAI
NRGNASTS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagctgccattaagctacctcataaagctattttagccgtacaccgcaattac
aaagatgctgcatcggtggttaaactggtttatgtaagcgattcgctaccgggtatcaca
cgccacaaaaaaggaaatggttttggatacaccttttccaataaaccactcactaataaa
gaggagctggaacgtattcgtaagctggccattccgccggcctgggaaaatgtgtggata
tgcgctttgcctaacggacatatccaggctaccggcatggatgcacgcaaacgcaagcaa
taccgctatcatgccatgtggcaggtggtgcgtaccgaaaccaagttccatcatatgtac
gagtttggaaaagcgctgcctgcgctgcggttacagctggaaaatgatattgcacaaaag
cagctgtgcgaatcaaaagtgctggctacggtagttagcctgatggaacgtacgtttatc
aggatagggaataatgaatatgaaaagctgaatggctcctatgggcttaccacgctcaag
gataaacatgtgtcgtttgaaggcgataaggtgcgtttttcatttatcggcaaaaaaggc
attgaccacgatatcacgctgaaaagtaaaaggctggccaaaatagtaaaacaatgcagg
gatataccgggtaaggaattgtttcaatattatgacgaggagggaaaaaggcacagtatt
gattccgggatggtgaataattatatacaggcagccaccggaatggattttacggccaag
gatttccgcacctgggcaggatcgttgctggcgctgcaaacattatgttcggcaggggag
gtattgtccgaaacagaaggcaaacgtaatattaatagtatgctggatgaggtaagtgcc
aaactgggcaatacccgcacggtatgcaaaaaatactatgtacaccccggactcatccgg
ttataccaggagcaaaaacttacacattatctgaaacagctggatcaactggaagaacct
gaccagatcaccggtcttacgcaggatgaacaggtgttgatgaaagtactgaaagccatt
aaccggggaaacgcttccacatcctaa
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