Filimonas lacunae: FLA_3693
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Entry
FLA_3693 CDS
T05172
Name
(GenBank) heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fln
Filimonas lacunae
Pathway
fln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FLA_3693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fln03019
]
FLA_3693
03110 Chaperones and folding catalysts [BR:
fln03110
]
FLA_3693
03029 Mitochondrial biogenesis [BR:
fln03029
]
FLA_3693
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fln04147
]
FLA_3693
Enzymes [BR:
fln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FLA_3693
Messenger RNA biogenesis [BR:
fln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FLA_3693
Chaperones and folding catalysts [BR:
fln03110
]
Heat shock proteins
HSP60 / Chaperonin
FLA_3693
Mitochondrial biogenesis [BR:
fln03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FLA_3693
Exosome [BR:
fln04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FLA_3693
Exosomal proteins of other body fluids (saliva and urine)
FLA_3693
Exosomal proteins of breast cancer cells
FLA_3693
Exosomal proteins of colorectal cancer cells
FLA_3693
Exosomal proteins of bladder cancer cells
FLA_3693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
TetR_C_41
Motif
Other DBs
NCBI-ProteinID:
BAV07662
LinkDB
All DBs
Position
4501431..4503023
Genome browser
AA seq
530 aa
AA seq
DB search
MKKGVDTLANAVKVTLGPKGRNVVIEKKFGAPAVTKDGVTVAKEIELEDAIENMGAQMVK
EVASKTADIAGDGTTTATVLAQAIISEGLKMVAAGANPMDLKRGIDKAVQAIVANLATQK
KDVGNNNKMIEQVATISANNDNTIGKLIAEAMGKVGKEGVITVEEAKGTDTTVDVVEGMQ
FDRGYISPYFVTNSEKMEVDLQSPYILIYDKKISAMKDILHILEKVAQSGRPLVIISEDL
EGEALATLVVNKLRGTLKVAAVKAPGFGDRRKEMLQDIAVLTAGTVISEETGFKLEAADI
TSLGQAASITINKDNTIIVGGKGKKADITARVNQIKAQIENTTSDYDKEKLQERLAKLGG
GVAVLYVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVAYIRAVESLDKVKGANA
DETTGISIVRRAVEEPLRQIVANCGLEGSIIIQGIREGEADYGFNARTETFEYLFKAGVI
DPTKVSRVALENAASIAGMLLTTECVVADKPKPEAAHSHAPAPGMGGMDY
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagggtgttgataccctggctaacgcggtgaaagtaaccttaggtcctaaaggc
cgtaacgtggttattgagaaaaaatttggtgcacctgctgttactaaagacggtgttacc
gttgctaaagaaattgaactggaagacgctatcgagaacatgggcgctcaaatggtaaaa
gaagtagcttctaaaaccgctgatatagctggtgatggtactactactgcaaccgttctg
gcacaagctattatcagcgaaggcctgaaaatggtagccgccggtgcaaacccaatggat
ttgaaacgcggtatcgataaagctgttcaggctatcgtagcaaacctggctactcagaaa
aaagatgttggtaacaacaacaaaatgattgagcaggtagctactatctctgccaacaac
gacaacactattggcaaactgattgccgaagcaatgggcaaagtgggtaaagaaggcgtt
atcactgttgaagaagcaaaaggtaccgatactaccgttgacgtagtagaaggtatgcaa
ttcgaccgtggctatatctctccttatttcgttaccaacagcgagaaaatggaagtagac
ctgcaaagcccttatatcctgatctacgataagaagatcagcgctatgaaagacattctg
cacattctggagaaagtagctcaaagcggccgtcctctggttatcatctctgaagacctg
gaaggtgaagcactggctaccctggtagtaaacaaattacgtggtaccctgaaagtagca
gctgttaaagctcctggtttcggcgatcgtcgtaaagaaatgttacaggatatcgcagtg
ctgactgccggtactgtaatcagcgaagaaactggtttcaaactggaagctgctgacatc
acttctttaggtcaggctgcttctatcactatcaacaaagacaacacgatcatcgttggt
ggtaagggtaaaaaagcagacatcactgcacgcgttaaccagattaaagcgcaaattgaa
aacactacttctgactacgataaagaaaaattacaagagcgcctggctaagttaggtggt
ggtgtagctgttctgtacgtaggtgctgctaccgaagtagaaatgaaagagaaaaaagac
cgcgtagacgacgctttacacgctacaagagcggctgttgaagaaggtattgttcctggt
ggtggtgttgcttacatccgtgctgtagaatcactggataaagtaaaaggcgcaaacgct
gacgaaactaccggtatcagcatcgttcgtcgcgctgtagaagagccattacgtcaaatc
gtagccaactgcggtttagaaggttctatcattatacaaggtattcgtgaaggggaagct
gattatggtttcaacgcacgtaccgaaacattcgaatacctgttcaaagcaggtgtaatc
gatcctaccaaagttagccgtgtagcgctggaaaacgctgcttctatcgctggtatgctg
ttaactactgagtgtgtagtggcagacaaaccaaagcctgaagctgctcacagccacgct
ccagctcctggtatgggcggtatggattactag
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