Filimonas lacunae: FLA_3903
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Entry
FLA_3903 CDS
T05172
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
fln
Filimonas lacunae
Pathway
fln02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FLA_3903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fln03021
]
FLA_3903
Transcription machinery [BR:
fln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FLA_3903
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_40
Sigma70_ECF
HTH_20
GerE
HTH_DeoR
HTH_30
HTH_23
HTH_17
HTH_24
HTH_10
HTH_19
HTH_Tnp_ISL3
DUF8494
DNA_pol3_delta_C
TnsD
HTH_3
HTH_11
HTH_36
PF0610-like_N
HTH_16
HTH_38
Fe_dep_repress
HTH_5
Mga
UPF0122
Motif
Other DBs
NCBI-ProteinID:
BAV07872
UniProt:
A0A173MJQ9
LinkDB
All DBs
Position
4780731..4781321
Genome browser
AA seq
196 aa
AA seq
DB search
MQDPSLYEQKQLFTRLASGDETAFRMLFDSYKSRFYAVALKMTRSEYVAEEIVQEVFVTL
WVKRDQLPAIEKPATYLFTIVYNSVYAHFKKLAQEKKIEQALTEQATDLESPLEVLLQNK
ENEHLLLRAIEQLPPQQKLVYKLIRQEKLSREEVAARLQISPNTVKNHLQEAVKFLRSYL
ERAMPLLIFLLCRQKS
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
ttgcaggacccttcattatacgaacagaaacaattatttacacggctggccagtggcgat
gaaactgctttccgcatgttattcgatagctataaaagccgtttttatgctgttgcttta
aaaatgacccgctcggaatacgtagccgaggaaattgtacaggaagtatttgtaacactt
tgggtgaagcgtgaccaattacccgctatagaaaagcctgctacctatctttttactatt
gtatataatagcgtatacgcgcattttaagaaactggcccaggaaaagaaaatagaacag
gcactgaccgagcaggctacagacttggaaagccccctggaagtgctgttgcaaaacaaa
gagaacgaacacctgcttttacgtgccatagaacaattacccccacagcaaaaactggta
tacaaactcatcagacaggaaaaactgagtcgggaagaggtagcagccaggttgcagatt
tcgcctaataccgtaaaaaaccatttacaggaagcagttaaatttctccgctcctacctg
gaaagagccatgcctttattgatctttttactgtgtcgccaaaaaagttaa
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