Filimonas lacunae: FLA_4133
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Entry
FLA_4133 CDS
T05172
Name
(GenBank) 3'-to-5' oligoribonuclease A, Bacillus type
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
fln
Filimonas lacunae
Pathway
fln00920
Sulfur metabolism
fln01100
Metabolic pathways
fln01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
FLA_4133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fln03400
]
FLA_4133
Enzymes [BR:
fln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
FLA_4133
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
FLA_4133
DNA repair and recombination proteins [BR:
fln03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
FLA_4133
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BAV08100
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All DBs
Position
complement(5079250..5080257)
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AA seq
335 aa
AA seq
DB search
MQSIEYFFPLLAKPHKAVITMHQKPDGDAMGSTLGLYHFLKALGHEVVIISPTNWASFLN
WMPDCNKVIDYEANKEKSATIVNNADWLFCLDFNVLHRTKNMEQLLTQAKCVKILIDHHQ
QPQEEAFNYGVSDTAKSSTCEMVYDFIAASGYADKLDVTIATCLYTGIMTDTGSFRFPGA
SAHVHRIVAHFKDLGLQHSPIHQNIYDSSLENRLRLLGNALLNRMEILYEYNTAIMVVPK
SDLLKFDAKTGDTEGLVNYLLSIQGIKMGALVIDRDEERKWSFRSKDGFDVNAFAREHFE
GGGHKNAAGGRSSDSLDVTVRKFKQVIQQYEAQLQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtattgaatattttttcccattactggctaagccgcacaaggctgtaattacc
atgcatcaaaagccggatggcgatgctatggggtctactttgggtttatatcacttttta
aaagcactggggcatgaggtggtgattatttcgccaaccaactgggccagcttcttaaac
tggatgcccgattgtaacaaagtgattgattatgaagctaataaggagaaatcagccaca
atagtaaataatgccgattggctgttttgcctggattttaacgtgctgcaccgtaccaaa
aacatggagcagttgcttacccaggctaaatgtgttaaaatattaatagatcaccaccag
caaccacaggaagaagcttttaactatggcgttagcgacactgctaaaagcagtacctgc
gaaatggtatatgattttatagccgcttcgggttatgccgataagctggacgtaactatt
gccacctgcctgtatacgggtattatgaccgataccggttcgtttcgctttccgggcgca
tctgcccatgtgcaccgtattgtggcgcattttaaagatctggggctgcaacattccccc
attcaccagaacatttatgatagctcactggaaaacagactgcgtttattaggtaacgcc
ctgttaaaccgcatggagatattatatgaatataacactgccattatggtagtgcccaaa
agcgatttattgaagtttgacgccaaaaccggcgatacagaagggttggtaaactacctg
ctttctatacagggtattaaaatgggcgccctggtaattgatcgtgacgaagaacgtaaa
tggagcttccgcagtaaagatggttttgatgtaaacgcctttgcccgtgagcattttgag
ggaggtggccataaaaatgctgccggcggtcgcagcagcgattcgctggatgtaacagtt
cgcaaattcaaacaagttatacaacaatacgaagcacaactacagtaa
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