KEGG   Filimonas lacunae: FLA_4391
Entry
FLA_4391          CDS       T05172                                 
Name
(GenBank) helicase
  KO
K19036  ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]
Organism
fln  Filimonas lacunae
Brite
KEGG Orthology (KO) [BR:fln00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:fln03009]
    FLA_4391
   03012 Translation factors [BR:fln03012]
    FLA_4391
Enzymes [BR:fln01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     FLA_4391
    5.6.2.5  RNA 5'-3' helicase
     FLA_4391
Ribosome biogenesis [BR:fln03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   FLA_4391
Translation factors [BR:fln03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    FLA_4391
SSDB
Motif
Pfam: AAA_11 AAA_12 AAA_30 Viral_helicase1 AAA_19 ResIII PhoH DEAD Helicase_RecD UvrD-helicase nSTAND3 AAA_22 SLFN-g3_helicase UvrD_C_2 PIF1 T2SSE AAA_16 Herpes_ori_bp AAA_25 NACHT AAA_24 AAA_7 NPHP3_N AAA AAA_14 ATPase_2 DAP3 ABC_tran SRP54 cobW UvrD_C RNase_Zc3h12a Pannexin_like
Other DBs
NCBI-ProteinID: BAV08355
UniProt: A0A173ML30
LinkDB
Position
5387589..5389496
AA seq 635 aa
MDYFKKLLDLLKTEREEDRKAYQELTETSSVAERRANGLCWYPIAIRGSEMSRGDYLTVE
VERTTHQDVAHQLRFGVSAVLFSNHDAKNNRVEGTITYQSRNTLKITLRTDELPDWSSDG
KLGIDLLFDDNSYDEMQNALKLATTLQEKPEEGRLIQILTGAKQPTFHTDIPHYTIPSLN
ASQQEAVNKILNANELAIVHGPPGTGKTTTLVQAIKALWKQDHKQILVVAPSNTAVDLLT
EKLSDEGLNVLRVGNPAKVSDRLMSLTLDSKASEHNSMKEIKKLKRQASEFRDMAHKYKR
NFGKAEREQRQALFTEARNIMKSVESTEQYIVNDLISKAQVITATLVGSNHYTVRHLKYH
TVVIDEAGQALEPACWIPILKAKKVVLAGDHCQLPPTVKSSEAARNGLSTTLLEKCTALH
PEAVTLLEEQYRMNENIMGYSSQVFYEGRLKAHTSVAQHLLHDADTALNFVDTSGCGFDE
KIEGTSTTNPEEAAFLFKHLTQFVTGLQGHYTNGHFPSIAVISPYKQQVQLLKEQLLHSP
ELQPYAEYITVNTIDSFQGQERDIVYISLTRSNTENKIGFLSDIRRMNVAMTRARKKLVV
IGDSGTLSNLAFYADFIAYAEEKNAYQSAWEFMDL
NT seq 1908 nt   +upstreamnt  +downstreamnt
atggattattttaagaagctgctggatttactgaaaacggaacgggaagaggatagaaaa
gcctaccaggaactaaccgaaacatcctctgtagccgaacgcagggccaatggactctgc
tggtaccctattgccataaggggttcggaaatgagccggggagattaccttacggtagaa
gtagaaaggactacgcaccaggatgtagcccatcagcttcgctttggcgtatctgccgta
ttgttttccaaccacgacgccaaaaacaaccgggtagaaggcactattacttatcaaagc
cgcaacacccttaaaataaccctgcgcacagatgagctgcccgattggagcagtgatggc
aagctgggcatagacctgttgtttgatgacaacagctatgatgaaatgcaaaacgccctg
aaactggctaccaccttacaggagaagccggaagaaggccggttgattcagatattgacc
ggcgctaaacagcctacctttcatacagatattccgcattataccattccctctctcaat
gcatcgcaacaagaggcggtgaacaaaatattgaacgcgaacgaactggctattgtgcac
ggccctcccggcaccggtaaaaccactaccctggtgcaggctattaaagcgttatggaaa
caggatcataaacaaattctggtagtggcccccagcaacacagcagtagacctgcttacc
gaaaagctgtcagacgaaggattgaatgtgctgcgtgtaggcaaccccgccaaagtatcg
gacaggctgatgtcgttaacactggacagcaaggcttccgaacacaacagcatgaaggaa
attaaaaaactgaaaaggcaggccagtgagttcagggatatggcacataaatacaagcgc
aattttggtaaagcggagcgggaacaacgccaggcattgtttaccgaagcccgtaatatt
atgaagtcggtagaatccacggaacaatacattgtgaacgaccttatttccaaagcacag
gtaattactgccacattagtgggttctaaccactacaccgtgcgccacctgaaataccat
actgtagtaatagacgaagccgggcaagcattagagccagcctgctggattcctatatta
aaagccaaaaaggtggtactggcgggagatcattgtcagctgccgcctaccgtaaaatcg
tctgaagcagcccgcaatggcttaagcactaccctgctggaaaaatgtaccgccctgcac
ccggaagcagtaaccctgctggaagagcaataccggatgaatgaaaacattatgggctac
agctcgcaggtgttttatgaaggccggttaaaagcacacacctctgtagcacaacacctg
ctgcacgatgcagataccgcgcttaactttgtagatacatcaggttgtggctttgacgaa
aaaatagaaggcaccagcaccaccaaccccgaagaagccgccttcctgtttaaacactta
acacaatttgttacaggtttacagggccattataccaacggtcacttcccaagcatagca
gtgatttcgccttacaaacaacaggtgcagctgctgaaagagcaactgctgcactcaccc
gaactgcagccttatgcggaatatattaccgtcaataccattgacagttttcaggggcag
gaaagggatattgtgtatatcagcttaacacgtagcaataccgaaaacaaaatcggtttt
ctatctgatatccggcgtatgaacgtggccatgacgcgggcacgcaaaaaactggtagtg
attggcgacagcggcactttgagcaatttggctttttatgccgattttatagcctacgcc
gaggaaaagaacgcctaccagagcgcctgggagtttatggacctgtag

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