Filimonas lacunae: FLA_4843
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Entry
FLA_4843 CDS
T05172
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
fln
Filimonas lacunae
Pathway
fln02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FLA_4843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fln03021
]
FLA_4843
Transcription machinery [BR:
fln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FLA_4843
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
GerE
HTH_23
Sigma70_r2
HTH_20
HTH_28
HTH_24
Xre-like-HTH
HTH_Tnp_ISL3
HTH_17
HTH_Mga
DUF134
HTH_40
HTH_10
HTH_38
AF_1859_C
HTH_29
Motif
Other DBs
NCBI-ProteinID:
BAV08796
UniProt:
A0A173MMT3
LinkDB
All DBs
Position
complement(5945928..5946560)
Genome browser
AA seq
210 aa
AA seq
DB search
MKGRESTDSVSAIWSAITMGGDAVAFEKLFHMLYSRLINFCNLYVRQREVSEEIVSDVFV
KCWMTREQLQHVNNPEVYLFVAVKNGSLNYLKSFSNYRVTSIDDETQLINSASFPEKELE
KKELFVKMNKAIAELPQQCQVIFRLVREDGMSYKEAAEILSISPRTVQTQLFRAMKKLNL
VLQGYADYPHSIFRDDAIAGIVIFLLVNFF
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaagagagagtacagatagtgtatccgccatatggagtgccataactatgggt
ggagatgctgtggcttttgagaagctctttcatatgttgtactctcgcttaattaatttt
tgtaatttatatgtgcgtcagcgggaagtgtctgaagaaattgtttcggatgtttttgta
aaatgctggatgacccgggagcaactgcaacatgtaaataatccggaggtatatctgttt
gtagcagtaaaaaacggctcactgaattatctcaaatctttctctaattatcgtgttact
tctatagatgacgaaacgcagctgataaacagtgccagctttccggaaaaggaactggaa
aagaaagagctgtttgtaaaaatgaacaaagctattgcggagctgccccaacaatgccag
gttatattccggcttgttagggaagatggcatgagctataaagaagcggctgaaatttta
tctatttccccccgtacagtgcaaacccaattgttccgtgccatgaaaaagctaaacctg
gtattacagggatatgctgattatccacacagtattttccgggacgatgcgattgccgga
atcgtgattttcctcctcgtaaattttttttag
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