Filimonas lacunae: FLA_4895
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Entry
FLA_4895 CDS
T05172
Name
(GenBank) rhamnogalacturonate lyase precursor
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
fln
Filimonas lacunae
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
FLA_4895
Enzymes [BR:
fln01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
FLA_4895
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Gene cluster
GFIT
Motif
Pfam:
CBM-like
fn3_3
CarboxypepD_reg
DUF4198
Rhamnogal_lyase
RhgB_N
DUF6795
EMC7_beta-sandw
BPA_C
SpaA
CarbopepD_reg_2
Motif
Other DBs
NCBI-ProteinID:
BAV08848
UniProt:
A0A173MN90
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Position
6007964..6009754
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AA seq
596 aa
AA seq
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MQCNKTVFNYYPVATGWFLSKTIDIWWTMNRILIFTLSLLLTQLAAHAQLSVTENGNTVT
LQNNLAAFSFNTTNADLTSIVNHKGVSLLGKKGRGYLLGPGFSMSPTTYSLVRKTDSLIE
IAFDHEADNHFHYSLHYIIRPGVSGVYCYLTQSHKAGDSAGIYGQTRWGISANESLFNYH
LVRDSIQGPMPAMSSFSDANKIQDWTYRLPDGTVYTKYNYADYIEDRYVHGMAGTASNLG
LFVIQASHEYLNGGPTKQYQNVHSTPYLICMFNCGHFLSDKRKSDDVITGDWQKTDGPFL
LYTNEGSDINAIWTNAKQQAQQEIAQWPYQWMQTPDYPLQRGTVTGTLLLNNQPAANTHM
ILAAPGYDWQAQTSGYIYAVRTDAKGFFTIPHVRAGSYTLYAYGANQTASFSKANITVSA
NKTTAIGVLAWQPANHGKILWQLGIADRTTRGFRFSDHPREYGIFDQVPDSLHFTIGQSK
EATDWYYAQTKPGNWYIHFTSNTSYTKPALLTIAIAGAAKNPTLQVLVNGQTVKTYKPGN
DASVYRSAVAGGYYQLLEIPFDGSLLQKGNNIITLQLPDVKNGGGIMYDAIKLEAE
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgtaacaaaacagtatttaactactatcctgtagctacaggatggtttttgtca
aaaactatagatatttggtggactatgaacaggatccttatttttaccctcagcctgtta
ctgacgcagcttgcagcccatgcccagctatcagtaacagaaaacggcaataccgttact
ttacaaaacaacctggctgcttttagctttaatactaccaatgccgaccttaccagtatt
gtaaaccataaaggagtaagcttgctgggcaaaaaaggcaggggttatttgctggggccg
ggcttttctatgtcgcccaccacctattcactggtgcgtaaaacagattccttaatagaa
atagcctttgaccacgaagccgacaaccattttcattatagcctgcattatatcatccgg
cctggtgtttccggtgtgtactgttatttaacccaaagccataaagcgggcgattccgca
ggcatttacggccaaacccgctggggcatcagcgccaacgaaagcctgtttaactatcac
ctggtgcgcgacagcatacaaggccccatgcctgccatgtcttcgttcagtgatgctaat
aaaatacaggactggacctaccgcctgcccgatggcactgtgtatactaaatacaactat
gccgattacattgaagaccgctacgtgcatggcatggccggcaccgcatcgaacctgggc
ctgtttgtgatacaggccagccacgaatacctgaacggcggccctaccaaacaataccag
aatgtacactccaccccttaccttatttgtatgtttaactgcggccactttttaagtgac
aagcgtaaaagcgatgatgtaattacaggtgactggcaaaaaacagatggcccttttcta
ctatacaccaacgaaggcagcgatatcaatgctatatggaccaacgctaaacaacaggca
cagcaggaaatagcccaatggccttaccaatggatgcaaacaccagactatccgttgcaa
aggggcacggtaaccggcacattactattgaacaatcaacccgctgctaacacacatatg
atactggctgcacctggttacgactggcaggcacaaaccagcggttacatttacgcagta
cgaacagatgccaaaggcttttttaccataccacatgttcgcgcaggcagctatacttta
tatgcctacggcgccaatcaaaccgccagctttagtaaggccaacattacggtaagcgca
aataaaaccactgctatcggtgtgcttgcatggcaacccgccaaccacggcaaaatattg
tggcagttgggtattgcagacagaaccacacgtggctttcgattcagcgatcatccgcgc
gagtatggcatctttgaccaggtgcccgatagtctgcattttaccataggccaaagtaag
gaagccaccgattggtactatgcacaaaccaaacccggcaactggtacattcattttacc
agcaataccagctacactaaacctgctttattaactatagccatagcaggcgctgctaaa
aaccctaccctgcaggtgttggtaaacgggcaaaccgtaaaaacctataaaccaggtaat
gatgccagcgtataccgtagtgccgttgccggcggttattatcaattgctggaaatacct
tttgatggcagcctgttacaaaaaggtaacaatatcatcaccttgcaattacccgatgtt
aaaaatggtggtggtattatgtatgatgctattaaactggaagcagaataa
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